Analysis of interatomic Contacts of Structural Units in PDB entry:
3G9H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3G9H entry

There is 1 chain in PDB entry 3G9H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 609ALA 870
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 3G9H. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
662 664Right-handed 310
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There are 4 sheets in PDB entry 3G9H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 671first strand
Strand 2
A
695 704anti-parallel
Strand 3
A
628 643anti-parallel
Strand 4
A
611 625anti-parallel
Strand 5
A
856 869parallel
Strand 6
A
812 818anti-parallel
Strand 7
A
741 752anti-parallel
Strand 8
A
775 779anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 671first strand
Strand 2
A
695 704anti-parallel
Strand 3
A
628 643anti-parallel
Strand 4
A
611 625anti-parallel
Strand 5
A
856 869parallel
Strand 6
A
812 818anti-parallel
Strand 7
A
741 752anti-parallel
Strand 8
A
784 787anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 680first strand
Strand 2
A
683 686anti-parallel
Strand 3
A
655 661anti-parallel
Strand 4
A
836 842anti-parallel
Strand 5
A
853 854anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
710 718first strand
Strand 2
A
722 731anti-parallel
Strand 3
A
793 801anti-parallel
Strand 4
A
758 763anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il