Analysis of interatomic Contacts of Structural Units in PDB entry:
3GBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GBW entry

There is 1 chain in PDB entry 3GBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1227PRO 1387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3GBW

There are 4 sheets in PDB entry 3GBW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1232 1235first strand
Strand 2
A
1381 1385anti-parallel
Strand 3
A
1262 1270anti-parallel
Strand 4
A
1314 1325anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1237 1240first strand
Strand 2
A
1345 1348anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1297 1301first strand
Strand 2
A
1276 1286anti-parallel
Strand 3
A
1305 1307anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1297 1301first strand
Strand 2
A
1276 1286anti-parallel
Strand 3
A
1330 1338anti-parallel
Strand 4
A
1252 1258anti-parallel
Strand 5
A
1359 1364anti-parallel
Strand 6
A
1351 1353anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il