Analysis of interatomic Contacts of Structural Units in PDB entry:
3GEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GEH entry

There is 1 chain in PDB entry 3GEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2LYS 459
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3GEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 38Right-handed alpha
Helix 2
2
A
95 107Right-handed alpha
Helix 3
3
A
115 124Right-handed alpha
Helix 4
4
A
128 141Right-handed alpha
Helix 5
5
A
143 156Right-handed alpha
Helix 6
6
A
158 180Right-handed alpha
Helix 7
7
A
193 221Right-handed alpha
Helix 8
8
A
233 246Right-handed alpha
Helix 9
9
A
256 262Right-handed alpha
Helix 10
10
A
315 326Right-handed alpha
Helix 11
11
A
341 345Right-handed 310
Helix 12
12
A
367 380Right-handed alpha
Helix 13
13
A
394 415Right-handed alpha
Helix 14
14
A
420 423Right-handed 310
Helix 15
15
A
424 440Right-handed alpha
Helix 16
16
A
444 454Right-handed alpha
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There are 2 sheets in PDB entry 3GEH. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 40first strand
Strand 2
A
51 57anti-parallel
Strand 3
A
67 74anti-parallel
Strand 4
A
85 90anti-parallel
Strand 5
A
22 27anti-parallel
Strand 6
A
7 10anti-parallel
Strand 7
A
110 111parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 266first strand
Strand 2
A
269 273anti-parallel
Strand 3
A
222 228parallel
Strand 4
A
303 309parallel
Strand 5
A
330 335parallel
Strand 6
A
357 360parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il