Analysis of interatomic Contacts of Structural Units in PDB entry:
3GET


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GET entry

There are 4 chains in PDB entry 3GET (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0SER 225
A
 LEU 227ARG 364
B
 MSE 1SER 225
B
 LEU 227ARG 364
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3GET. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 10Right-handed 310
Helix 2
2
A
18 26Right-handed alpha
Helix 3
3
A
44 55Right-handed alpha
Helix 4
4
A
56 58Right-handed 310
Helix 5
5
A
66 78Right-handed alpha
Helix 6
6
A
80 82Right-handed 310
Helix 7
7
A
89 102Right-handed alpha
Helix 8
8
A
116 126Right-handed alpha
Helix 9
9
A
138 149Right-handed alpha
Helix 10
10
A
170 180Right-handed alpha
Helix 11
11
A
193 201Right-handed alpha
Helix 12
12
A
202 205Right-handed 310
Helix 13
13
A
207 215Right-handed alpha
Helix 14
14
A
241 252Right-handed alpha
Helix 15
15
A
258 270Right-handed alpha
Helix 16
16
A
271 296Right-handed alpha
Helix 17
17
A
316 326Right-handed alpha
Helix 18
18
A
335 338Right-handed 310
Helix 19
19
A
348 364Right-handed alpha
Helix 20
20
B
4 10Right-handed 310
Helix 21
21
B
18 27Right-handed alpha
Helix 22
22
B
44 55Right-handed alpha
Helix 23
23
B
56 58Right-handed 310
Helix 24
24
B
66 78Right-handed alpha
Helix 25
25
B
80 82Right-handed 310
Helix 26
26
B
88 102Right-handed alpha
Helix 27
27
B
116 123Right-handed alpha
Helix 28
28
B
124 126Right-handed 310
Helix 29
29
B
138 149Right-handed alpha
Helix 30
30
B
170 180Right-handed alpha
Helix 31
31
B
193 201Right-handed alpha
Helix 32
32
B
202 205Right-handed 310
Helix 33
33
B
207 215Right-handed alpha
Helix 34
34
B
230 234Right-handed 310
Helix 35
35
B
241 252Right-handed alpha
Helix 36
36
B
258 270Right-handed alpha
Helix 37
37
B
271 296Right-handed alpha
Helix 38
38
B
316 326Right-handed alpha
Helix 39
39
B
335 338Right-handed 310
Helix 40
40
B
348 364Right-handed alpha
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There are 6 sheets in PDB entry 3GET. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
329 330parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 87first strand
Strand 2
A
236 240anti-parallel
Strand 3
A
218 223anti-parallel
Strand 4
A
186 190parallel
Strand 5
A
153 159parallel
Strand 6
A
107 110parallel
Strand 7
A
128 131parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 300first strand
Strand 2
A
307 311anti-parallel
Strand 3
A
341 345anti-parallel
Strand 4
A
332 333anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 33first strand
Strand 2
B
329 330parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 87first strand
Strand 2
B
236 240anti-parallel
Strand 3
B
218 223anti-parallel
Strand 4
B
186 190parallel
Strand 5
B
153 159parallel
Strand 6
B
107 110parallel
Strand 7
B
128 131parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
299 300first strand
Strand 2
B
307 311anti-parallel
Strand 3
B
341 345anti-parallel
Strand 4
B
332 333anti-parallel
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