Analysis of interatomic Contacts of Structural Units in PDB entry:
3GG2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GG2 entry

There are 4 chains in PDB entry 3GG2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 78GLY 512
B
 LEU 79GLY 512
C
 LEU 79GLY 512
D
 LEU 79GLY 512
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 3GG2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
87 100Right-handed alpha
Helix 2
2
A
110 120Right-handed alpha
Helix 3
3
A
128 139Right-handed alpha
Helix 4
4
A
147 152Right-handed alpha
Helix 5
5
A
153 155Right-handed 310
Helix 6
6
A
174 188Right-handed alpha
Helix 7
7
A
203 219Right-handed alpha
Helix 8
8
A
238 245Right-handed alpha
Helix 9
9
A
255 267Right-handed alpha
Helix 10
10
A
280 313Right-handed alpha
Helix 11
11
A
315 325Right-handed alpha
Helix 12
12
A
343 359Right-handed alpha
Helix 13
13
A
363 377Right-handed alpha
Helix 14
14
A
378 388Right-handed alpha
Helix 15
15
A
414 426Right-handed alpha
Helix 16
16
A
437 446Right-handed alpha
Helix 17
17
A
447 449Right-handed 310
Helix 18
18
A
454 459Right-handed alpha
Helix 19
19
A
471 475Right-handed 310
Helix 20
20
A
478 486Right-handed alpha
Helix 21
21
B
87 100Right-handed alpha
Helix 22
22
B
110 119Right-handed alpha
Helix 23
23
B
128 139Right-handed alpha
Helix 24
24
B
147 152Right-handed alpha
Helix 25
25
B
153 155Right-handed 310
Helix 26
26
B
174 188Right-handed alpha
Helix 27
27
B
203 219Right-handed alpha
Helix 28
28
B
238 245Right-handed alpha
Helix 29
29
B
255 267Right-handed alpha
Helix 30
30
B
280 313Right-handed alpha
Helix 31
31
B
315 325Right-handed alpha
Helix 32
32
B
344 359Right-handed alpha
Helix 33
33
B
363 377Right-handed alpha
Helix 34
34
B
378 388Right-handed alpha
Helix 35
35
B
414 426Right-handed alpha
Helix 36
36
B
437 446Right-handed alpha
Helix 37
37
B
447 449Right-handed 310
Helix 38
38
B
454 460Right-handed alpha
Helix 39
39
B
471 475Right-handed 310
Helix 40
40
B
478 484Right-handed alpha
Helix 41
41
C
87 100Right-handed alpha
Helix 42
42
C
110 118Right-handed alpha
Helix 43
43
C
128 139Right-handed alpha
Helix 44
44
C
147 152Right-handed alpha
Helix 45
45
C
153 155Right-handed 310
Helix 46
46
C
174 188Right-handed alpha
Helix 47
47
C
203 219Right-handed alpha
Helix 48
48
C
238 245Right-handed alpha
Helix 49
49
C
255 267Right-handed alpha
Helix 50
50
C
280 313Right-handed alpha
Helix 51
51
C
315 325Right-handed alpha
Helix 52
52
C
343 359Right-handed alpha
Helix 53
53
C
363 377Right-handed alpha
Helix 54
54
C
378 388Right-handed alpha
Helix 55
55
C
414 426Right-handed alpha
Helix 56
56
C
437 446Right-handed alpha
Helix 57
57
C
447 449Right-handed 310
Helix 58
58
C
454 459Right-handed alpha
Helix 59
59
C
471 475Right-handed 310
Helix 60
60
C
478 486Right-handed alpha
Helix 61
61
D
87 100Right-handed alpha
Helix 62
62
D
110 120Right-handed alpha
Helix 63
63
D
128 139Right-handed alpha
Helix 64
64
D
147 152Right-handed alpha
Helix 65
65
D
153 155Right-handed 310
Helix 66
66
D
174 188Right-handed alpha
Helix 67
67
D
203 219Right-handed alpha
Helix 68
68
D
238 245Right-handed alpha
Helix 69
69
D
255 267Right-handed alpha
Helix 70
70
D
280 313Right-handed alpha
Helix 71
71
D
315 325Right-handed alpha
Helix 72
72
D
343 359Right-handed alpha
Helix 73
73
D
363 377Right-handed alpha
Helix 74
74
D
378 388Right-handed alpha
Helix 75
75
D
414 426Right-handed alpha
Helix 76
76
D
437 446Right-handed alpha
Helix 77
77
D
447 449Right-handed 310
Helix 78
78
D
454 459Right-handed alpha
Helix 79
79
D
471 475Right-handed 310
Helix 80
80
D
478 486Right-handed alpha
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There are 11 sheets in PDB entry 3GG2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
103 107parallel
Strand 3
A
80 84parallel
Strand 4
A
157 160parallel
Strand 5
A
192 196parallel
Strand 6
A
225 229parallel
Strand 7
A
249 253anti-parallel
Strand 8
A
276 279parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
450 451first strand
Strand 2
A
429 433parallel
Strand 3
A
396 400parallel
Strand 4
A
465 467parallel
Strand 5
A
490 493parallel
Strand 6
A
507 510parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 145first strand
Strand 2
B
103 107parallel
Strand 3
B
80 84parallel
Strand 4
B
157 160parallel
Strand 5
B
193 196parallel
Strand 6
B
226 229parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 252first strand
Strand 2
B
276 279parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
450 451first strand
Strand 2
B
429 433parallel
Strand 3
B
396 400parallel
Strand 4
B
465 467parallel
Strand 5
B
490 493parallel
Strand 6
B
507 510parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
142 145first strand
Strand 2
C
103 107parallel
Strand 3
C
80 84parallel
Strand 4
C
157 160parallel
Strand 5
C
193 196parallel
Strand 6
C
226 229parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
249 252first strand
Strand 2
C
276 279parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
450 451first strand
Strand 2
C
429 433parallel
Strand 3
C
396 400parallel
Strand 4
C
465 467parallel
Strand 5
C
490 493parallel
Strand 6
C
507 510parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
142 145first strand
Strand 2
D
103 107parallel
Strand 3
D
80 84parallel
Strand 4
D
157 160parallel
Strand 5
D
193 196parallel
Strand 6
D
226 229parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
249 252first strand
Strand 2
D
276 279parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
450 451first strand
Strand 2
D
429 433parallel
Strand 3
D
396 400parallel
Strand 4
D
465 467parallel
Strand 5
D
490 493parallel
Strand 6
D
507 510parallel
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