Analysis of interatomic Contacts of Structural Units in PDB entry:
3GG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GG7 entry

There is 1 chain in PDB entry 3GG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0THR 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3GG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 11Right-handed 310
Helix 2
2
A
13 24Right-handed alpha
Helix 3
3
A
34 36Right-handed 310
Helix 4
4
A
37 43Right-handed alpha
Helix 5
5
A
44 46Right-handed 310
Helix 6
6
A
58 62Right-handed 310
Helix 7
7
A
65 68Right-handed 310
Helix 8
8
A
69 76Right-handed alpha
Helix 9
9
A
77 79Right-handed 310
Helix 10
10
A
90 95Right-handed 310
Helix 11
11
A
96 114Right-handed alpha
Helix 12
12
A
126 137Right-handed alpha
Helix 13
13
A
151 161Right-handed alpha
Helix 14
14
A
168 173Right-handed alpha
Helix 15
15
A
174 184Right-handed alpha
Helix 16
16
A
185 187Right-handed 310
Helix 17
17
A
206 208Right-handed 310
Helix 18
18
A
209 222Right-handed alpha
Helix 19
19
A
224 242Right-handed alpha
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There are 3 sheets in PDB entry 3GG7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
27 30parallel
Strand 3
A
51 53parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 86first strand
Strand 2
A
117 122parallel
Strand 3
A
141 146parallel
Strand 4
A
164 167parallel
Strand 5
A
189 191parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 200first strand
Strand 2
A
203 204anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il