Analysis of interatomic Contacts of Structural Units in PDB entry:
3GGZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GGZ entry

There are 8 chains in PDB entry 3GGZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3GLU 188
B
 MET 5SER 190
C
 MET 5LYS 186
D
 MET 5SER 192
E
 ASP 188GLY 204
F
 ASP 188GLY 204
G
 ASP 189GLY 204
H
 VAL 187GLY 204
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 3GGZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 46Right-handed alpha
Helix 2
2
A
49 83Right-handed alpha
Helix 3
3
A
83 88Right-handed alpha
Helix 4
4
A
92 98Right-handed alpha
Helix 5
5
A
104 119Right-handed alpha
Helix 6
6
A
124 134Right-handed alpha
Helix 7
7
A
137 146Right-handed alpha
Helix 8
8
A
152 160Right-handed alpha
Helix 9
9
A
165 181Right-handed alpha
Helix 10
10
B
7 46Right-handed alpha
Helix 11
11
B
49 83Right-handed alpha
Helix 12
12
B
83 88Right-handed alpha
Helix 13
13
B
92 98Right-handed alpha
Helix 14
14
B
104 119Right-handed alpha
Helix 15
15
B
124 134Right-handed alpha
Helix 16
16
B
137 146Right-handed alpha
Helix 17
17
B
152 160Right-handed alpha
Helix 18
18
B
165 181Right-handed alpha
Helix 19
19
C
7 46Right-handed alpha
Helix 20
20
C
49 83Right-handed alpha
Helix 21
21
C
83 88Right-handed alpha
Helix 22
22
C
92 98Right-handed alpha
Helix 23
23
C
104 119Right-handed alpha
Helix 24
24
C
124 134Right-handed alpha
Helix 25
25
C
137 146Right-handed alpha
Helix 26
26
C
152 160Right-handed alpha
Helix 27
27
C
165 181Right-handed alpha
Helix 28
28
D
8 46Right-handed alpha
Helix 29
29
D
49 83Right-handed alpha
Helix 30
30
D
83 88Right-handed alpha
Helix 31
31
D
92 98Right-handed alpha
Helix 32
32
D
105 119Right-handed alpha
Helix 33
33
D
122 124Right-handed 310
Helix 34
34
D
125 134Right-handed alpha
Helix 35
35
D
137 146Right-handed alpha
Helix 36
36
D
152 160Right-handed alpha
Helix 37
37
D
165 181Right-handed alpha
Helix 38
38
D
184 188Right-handed 310
Helix 39
39
E
190 202Right-handed alpha
Helix 40
40
F
192 204Right-handed alpha
Helix 41
41
G
194 199Right-handed alpha
Helix 42
42
G
200 203Right-handed 310
Helix 43
43
H
191 203Right-handed alpha
Back to top of page
There are no sheets in PDB entry 3GGZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il