Analysis of interatomic Contacts of Structural Units in PDB entry:
3GH1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GH1 entry

There are 4 chains in PDB entry 3GH1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 462
B
 SER 2HIS 462
C
 SER 2VAL 453
D
 SER 2THR 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 3GH1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 23Right-handed alpha
Helix 2
2
A
31 45Right-handed alpha
Helix 3
3
A
82 84Right-handed 310
Helix 4
4
A
92 112Right-handed alpha
Helix 5
5
A
122 138Right-handed alpha
Helix 6
6
A
159 176Right-handed alpha
Helix 7
7
A
186 189Right-handed 310
Helix 8
8
A
190 203Right-handed alpha
Helix 9
9
A
236 248Right-handed alpha
Helix 10
10
A
257 272Right-handed alpha
Helix 11
11
A
273 277Right-handed 310
Helix 12
12
A
288 290Right-handed 310
Helix 13
13
A
291 307Right-handed alpha
Helix 14
14
A
308 314Right-handed 310
Helix 15
15
A
320 342Right-handed alpha
Helix 16
16
A
355 360Right-handed alpha
Helix 17
17
A
365 371Right-handed alpha
Helix 18
18
A
379 400Right-handed alpha
Helix 19
19
A
400 411Right-handed alpha
Helix 20
20
A
418 435Right-handed alpha
Helix 21
21
B
17 23Right-handed alpha
Helix 22
22
B
30 45Right-handed alpha
Helix 23
23
B
56 61Right-handed 310
Helix 24
24
B
82 84Right-handed 310
Helix 25
25
B
92 112Right-handed alpha
Helix 26
26
B
122 138Right-handed alpha
Helix 27
27
B
159 176Right-handed alpha
Helix 28
28
B
186 189Right-handed 310
Helix 29
29
B
190 203Right-handed alpha
Helix 30
30
B
236 248Right-handed alpha
Helix 31
31
B
257 272Right-handed alpha
Helix 32
32
B
273 277Right-handed 310
Helix 33
33
B
288 290Right-handed 310
Helix 34
34
B
291 307Right-handed alpha
Helix 35
35
B
308 314Right-handed 310
Helix 36
36
B
320 342Right-handed alpha
Helix 37
37
B
355 360Right-handed alpha
Helix 38
38
B
365 371Right-handed alpha
Helix 39
39
B
379 400Right-handed alpha
Helix 40
40
B
400 411Right-handed alpha
Helix 41
41
B
418 435Right-handed alpha
Helix 42
42
C
17 22Right-handed alpha
Helix 43
43
C
23 25Right-handed 310
Helix 44
44
C
31 45Right-handed alpha
Helix 45
45
C
55 60Right-handed alpha
Helix 46
46
C
82 84Right-handed 310
Helix 47
47
C
92 113Right-handed alpha
Helix 48
48
C
123 138Right-handed alpha
Helix 49
49
C
159 176Right-handed alpha
Helix 50
50
C
186 189Right-handed 310
Helix 51
51
C
190 204Right-handed alpha
Helix 52
52
C
236 248Right-handed alpha
Helix 53
53
C
257 272Right-handed alpha
Helix 54
54
C
273 277Right-handed 310
Helix 55
55
C
288 290Right-handed 310
Helix 56
56
C
291 307Right-handed alpha
Helix 57
57
C
308 314Right-handed 310
Helix 58
58
C
320 342Right-handed alpha
Helix 59
59
C
355 359Right-handed 310
Helix 60
60
C
365 371Right-handed alpha
Helix 61
61
C
379 400Right-handed alpha
Helix 62
62
C
400 411Right-handed alpha
Helix 63
63
C
418 435Right-handed alpha
Helix 64
64
D
17 22Right-handed alpha
Helix 65
65
D
23 25Right-handed 310
Helix 66
66
D
30 45Right-handed alpha
Helix 67
67
D
56 61Right-handed 310
Helix 68
68
D
82 84Right-handed 310
Helix 69
69
D
92 112Right-handed alpha
Helix 70
70
D
122 138Right-handed alpha
Helix 71
71
D
159 176Right-handed alpha
Helix 72
72
D
186 189Right-handed 310
Helix 73
73
D
190 203Right-handed alpha
Helix 74
74
D
236 248Right-handed alpha
Helix 75
75
D
257 272Right-handed alpha
Helix 76
76
D
273 277Right-handed 310
Helix 77
77
D
288 290Right-handed 310
Helix 78
78
D
291 307Right-handed alpha
Helix 79
79
D
308 314Right-handed 310
Helix 80
80
D
320 342Right-handed alpha
Helix 81
81
D
355 360Right-handed alpha
Helix 82
82
D
365 371Right-handed alpha
Helix 83
83
D
379 400Right-handed alpha
Helix 84
84
D
400 411Right-handed alpha
Helix 85
85
D
418 435Right-handed alpha
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There are 16 sheets in PDB entry 3GH1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
73 79anti-parallel
Strand 3
A
64 70anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 87first strand
Strand 2
A
90 91anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 233first strand
Strand 2
A
210 214parallel
Strand 3
A
179 182parallel
Strand 4
A
149 153parallel
Strand 5
A
250 253parallel
Strand 6
A
283 287parallel
Strand 7
A
315 318parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
413 415first strand
Strand 2
A
450 452parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
73 79anti-parallel
Strand 3
B
64 70anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 87first strand
Strand 2
B
90 91anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 233first strand
Strand 2
B
210 214parallel
Strand 3
B
179 182parallel
Strand 4
B
149 153parallel
Strand 5
B
250 253parallel
Strand 6
B
283 287parallel
Strand 7
B
315 318parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
413 415first strand
Strand 2
B
450 452parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
73 79anti-parallel
Strand 3
C
64 70anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
86 87first strand
Strand 2
C
90 91anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 233first strand
Strand 2
C
210 214parallel
Strand 3
C
179 182parallel
Strand 4
C
149 153parallel
Strand 5
C
250 253parallel
Strand 6
C
283 287parallel
Strand 7
C
315 318parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
413 415first strand
Strand 2
C
450 452parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 7first strand
Strand 2
D
73 79anti-parallel
Strand 3
D
64 70anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 87first strand
Strand 2
D
90 91anti-parallel
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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
230 233first strand
Strand 2
D
210 214parallel
Strand 3
D
179 182parallel
Strand 4
D
149 153parallel
Strand 5
D
250 253parallel
Strand 6
D
283 287parallel
Strand 7
D
315 318parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
413 415first strand
Strand 2
D
450 452parallel
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