Analysis of interatomic Contacts of Structural Units in PDB entry:
3GH7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GH7 entry

There is 1 chain in PDB entry 3GH7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -16VAL 502
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3GH7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 69Right-handed alpha
Helix 2
2
A
93 97Right-handed 310
Helix 3
3
A
116 131Right-handed alpha
Helix 4
4
A
174 187Right-handed alpha
Helix 5
5
A
211 216Right-handed alpha
Helix 6
6
A
221 225Right-handed 310
Helix 7
7
A
231 244Right-handed alpha
Helix 8
8
A
259 266Right-handed alpha
Helix 9
9
A
267 270Right-handed 310
Helix 10
10
A
293 311Right-handed alpha
Helix 11
11
A
327 345Right-handed alpha
Helix 12
12
A
354 358Right-handed 310
Helix 13
13
A
377 384Right-handed alpha
Helix 14
14
A
391 395Right-handed 310
Helix 15
15
A
415 421Right-handed alpha
Helix 16
16
A
423 428Right-handed alpha
Helix 17
17
A
447 456Right-handed alpha
Helix 18
18
A
457 468Right-handed alpha
Helix 19
19
A
469 473Right-handed 310
Helix 20
20
A
474 492Right-handed alpha
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There are 2 sheets in PDB entry 3GH7. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 33first strand
Strand 2
A
147 155anti-parallel
Strand 3
A
101 105anti-parallel
Strand 4
A
109 114anti-parallel
Strand 5
A
84 88parallel
Strand 6
A
39 43parallel
Strand 7
A
73 76parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 167first strand
Strand 2
A
192 196parallel
Strand 3
A
248 252parallel
Strand 4
A
315 317parallel
Strand 5
A
348 352parallel
Strand 6
A
366 369parallel
Strand 7
A
386 389parallel
Strand 8
A
432 440parallel
Strand 9
A
161 167parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il