Analysis of interatomic Contacts of Structural Units in PDB entry:
3GHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GHY entry

There are 2 chains in PDB entry 3GHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0TYR 325
B
 SER 0TYR 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 3GHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
32 42Right-handed alpha
Helix 3
3
A
62 67Right-handed alpha
Helix 4
4
A
77 86Right-handed alpha
Helix 5
5
A
87 89Right-handed 310
Helix 6
6
A
128 134Right-handed alpha
Helix 7
7
A
135 137Right-handed 310
Helix 8
8
A
174 187Right-handed alpha
Helix 9
9
A
196 207Right-handed alpha
Helix 10
10
A
210 219Right-handed alpha
Helix 11
11
A
221 228Right-handed alpha
Helix 12
12
A
228 248Right-handed alpha
Helix 13
13
A
256 266Right-handed alpha
Helix 14
14
A
286 291Right-handed alpha
Helix 15
15
A
291 302Right-handed alpha
Helix 16
16
A
305 322Right-handed alpha
Helix 17
17
B
10 23Right-handed alpha
Helix 18
18
B
32 43Right-handed alpha
Helix 19
19
B
62 67Right-handed alpha
Helix 20
20
B
77 79Right-handed 310
Helix 21
21
B
80 88Right-handed alpha
Helix 22
22
B
128 134Right-handed alpha
Helix 23
23
B
135 137Right-handed 310
Helix 24
24
B
174 187Right-handed alpha
Helix 25
25
B
196 209Right-handed alpha
Helix 26
26
B
210 219Right-handed alpha
Helix 27
27
B
221 228Right-handed alpha
Helix 28
28
B
228 247Right-handed alpha
Helix 29
29
B
256 266Right-handed alpha
Helix 30
30
B
272 277Right-handed alpha
Helix 31
31
B
286 291Right-handed alpha
Helix 32
32
B
291 302Right-handed alpha
Helix 33
33
B
305 322Right-handed alpha
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There are 4 sheets in PDB entry 3GHY. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
27 30parallel
Strand 3
A
4 7parallel
Strand 4
A
71 74parallel
Strand 5
A
97 100parallel
Strand 6
A
139 144parallel
Strand 7
A
163 167anti-parallel
Strand 8
A
190 193parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
44 48anti-parallel
Strand 3
A
155 158parallel
Strand 4
A
148 150anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 60first strand
Strand 2
B
27 30parallel
Strand 3
B
4 7parallel
Strand 4
B
69 74parallel
Strand 5
B
92 100parallel
Strand 6
B
139 144parallel
Strand 7
B
163 167anti-parallel
Strand 8
B
190 193parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 55first strand
Strand 2
B
44 48anti-parallel
Strand 3
B
155 160parallel
Strand 4
B
147 150anti-parallel
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