Analysis of interatomic Contacts of Structural Units in PDB entry:
3GK5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GK5 entry

There is 1 chain in PDB entry 3GK5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 101GLU 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3GK5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
105 112Right-handed alpha
Helix 2
2
A
123 128Right-handed alpha
Helix 3
3
A
139 147Right-handed alpha
Helix 4
4
A
148 150Right-handed 310
Helix 5
5
A
163 175Right-handed alpha
Helix 6
6
A
185 193Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3GK5.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
180 183parallel
Strand 3
A
156 159parallel
Strand 4
A
117 120parallel
Strand 5
A
136 137parallel
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