Analysis of interatomic Contacts of Structural Units in PDB entry:
3GLF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3GLF entry

There are 4 chains in PDB entry 3GLF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	HIS 333
B	VAL 5	PRO 368
C	GLN 4	PRO 368
D	SER 2	LEU 214

There are200 helices in PDB entry 3GLF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	5	13	Right-handed alpha
Helix 2	2	A	27	44	Right-handed alpha
Helix 3	3	A	92	101	Right-handed alpha
Helix 4	4	A	118	123	Right-handed alpha
Helix 5	5	A	125	130	Right-handed alpha
Helix 6	6	A	146	158	Right-handed alpha
Helix 7	7	A	163	175	Right-handed alpha
Helix 8	8	A	177	192	Right-handed alpha
Helix 9	9	A	198	204	Right-handed alpha
Helix 10	10	A	213	224	Right-handed alpha
Helix 11	11	A	225	239	Right-handed alpha
Helix 12	12	A	242	264	Right-handed alpha
Helix 13	13	A	268	277	Right-handed alpha
Helix 14	14	A	281	293	Right-handed alpha
Helix 15	15	A	296	314	Right-handed alpha
Helix 16	16	A	319	331	Right-handed alpha
Helix 17	17	B	5	10	Right-handed alpha
Helix 18	18	B	21	34	Right-handed alpha
Helix 19	19	B	50	64	Right-handed alpha
Helix 20	20	B	76	85	Right-handed alpha
Helix 21	21	B	100	108	Right-handed alpha
Helix 22	22	B	109	111	Right-handed 310
Helix 23	23	B	128	131	Right-handed 310
Helix 24	24	B	132	145	Right-handed alpha
Helix 25	25	B	158	162	Right-handed 310
Helix 26	26	B	163	168	Right-handed alpha
Helix 27	27	B	179	194	Right-handed alpha
Helix 28	28	B	199	210	Right-handed alpha
Helix 29	29	B	213	228	Right-handed alpha
Helix 30	30	B	233	244	Right-handed alpha
Helix 31	31	B	247	258	Right-handed alpha
Helix 32	32	B	260	275	Right-handed alpha
Helix 33	33	B	277	295	Right-handed alpha
Helix 34	34	B	298	302	Right-handed 310
Helix 35	35	B	306	319	Right-handed alpha
Helix 36	36	B	321	339	Right-handed alpha
Helix 37	37	B	344	359	Right-handed alpha
Helix 38	38	C	5	10	Right-handed alpha
Helix 39	39	C	14	18	Right-handed 310
Helix 40	40	C	21	34	Right-handed alpha
Helix 41	41	C	50	64	Right-handed alpha
Helix 42	42	C	76	84	Right-handed alpha
Helix 43	43	C	100	110	Right-handed alpha
Helix 44	44	C	128	131	Right-handed 310
Helix 45	45	C	132	145	Right-handed alpha
Helix 46	46	C	163	168	Right-handed alpha
Helix 47	47	C	179	194	Right-handed alpha
Helix 48	48	C	199	210	Right-handed alpha
Helix 49	49	C	213	229	Right-handed alpha
Helix 50	50	C	233	242	Right-handed alpha
Helix 51	51	C	246	258	Right-handed alpha
Helix 52	52	C	260	274	Right-handed alpha
Helix 53	53	C	277	298	Right-handed alpha
Helix 54	54	C	299	302	Right-handed 310
Helix 55	55	C	309	320	Right-handed alpha
Helix 56	56	C	321	339	Right-handed alpha
Helix 57	57	C	344	359	Right-handed alpha
Helix 58	58	D	5	10	Right-handed alpha
Helix 59	59	D	14	18	Right-handed 310
Helix 60	60	D	21	35	Right-handed alpha
Helix 61	61	D	50	64	Right-handed alpha
Helix 62	62	D	76	84	Right-handed alpha
Helix 63	63	D	100	110	Right-handed alpha
Helix 64	64	D	128	131	Right-handed 310
Helix 65	65	D	132	145	Right-handed alpha
Helix 66	66	D	158	162	Right-handed 310
Helix 67	67	D	163	169	Right-handed alpha
Helix 68	68	D	179	194	Right-handed alpha
Helix 69	69	D	199	211	Right-handed alpha
Helix 70	70	D	213	228	Right-handed alpha
Helix 71	71	D	233	241	Right-handed alpha
Helix 72	72	D	246	258	Right-handed alpha
Helix 73	73	D	260	275	Right-handed alpha
Helix 74	74	D	277	296	Right-handed alpha
Helix 75	75	D	298	302	Right-handed 310
Helix 76	76	D	303	307	Right-handed 310
Helix 77	77	D	309	320	Right-handed alpha
Helix 78	78	D	321	338	Right-handed alpha
Helix 79	79	D	339	342	Right-handed 310
Helix 80	80	D	345	358	Right-handed alpha
Helix 81	81	E	4	6	Right-handed 310
Helix 82	82	E	7	21	Right-handed alpha
Helix 83	83	E	36	50	Right-handed alpha
Helix 84	84	E	62	70	Right-handed alpha
Helix 85	85	E	89	100	Right-handed alpha
Helix 86	86	E	116	120	Right-handed 310
Helix 87	87	E	121	134	Right-handed alpha
Helix 88	88	E	147	151	Right-handed 310
Helix 89	89	E	152	157	Right-handed alpha
Helix 90	90	E	168	177	Right-handed alpha
Helix 91	91	E	183	194	Right-handed alpha
Helix 92	92	E	199	207	Right-handed alpha
Helix 93	93	E	208	227	Right-handed alpha
Helix 94	94	E	229	231	Right-handed 310
Helix 95	95	E	232	237	Right-handed alpha
Helix 96	96	E	240	259	Right-handed alpha
Helix 97	97	E	270	281	Right-handed alpha
Helix 98	98	E	282	303	Right-handed alpha
Helix 99	99	E	307	324	Right-handed alpha
Helix 100	100	F	5	13	Right-handed alpha
Helix 101	101	F	27	44	Right-handed alpha
Helix 102	102	F	92	101	Right-handed alpha
Helix 103	103	F	118	123	Right-handed alpha
Helix 104	104	F	124	128	Right-handed 310
Helix 105	105	F	146	158	Right-handed alpha
Helix 106	106	F	163	175	Right-handed alpha
Helix 107	107	F	177	192	Right-handed alpha
Helix 108	108	F	198	204	Right-handed alpha
Helix 109	109	F	213	224	Right-handed alpha
Helix 110	110	F	225	239	Right-handed alpha
Helix 111	111	F	242	264	Right-handed alpha
Helix 112	112	F	268	277	Right-handed alpha
Helix 113	113	F	281	293	Right-handed alpha
Helix 114	114	F	294	314	Right-handed alpha
Helix 115	115	F	319	331	Right-handed alpha
Helix 116	116	G	-9	-3	Right-handed 310
Helix 117	117	G	5	10	Right-handed alpha
Helix 118	118	G	21	34	Right-handed alpha
Helix 119	119	G	50	62	Right-handed alpha
Helix 120	120	G	76	85	Right-handed alpha
Helix 121	121	G	100	108	Right-handed alpha
Helix 122	122	G	109	111	Right-handed 310
Helix 123	123	G	128	131	Right-handed 310
Helix 124	124	G	132	145	Right-handed alpha
Helix 125	125	G	158	162	Right-handed 310
Helix 126	126	G	163	168	Right-handed alpha
Helix 127	127	G	179	194	Right-handed alpha
Helix 128	128	G	199	210	Right-handed alpha
Helix 129	129	G	213	228	Right-handed alpha
Helix 130	130	G	233	244	Right-handed alpha
Helix 131	131	G	247	258	Right-handed alpha
Helix 132	132	G	260	274	Right-handed alpha
Helix 133	133	G	277	295	Right-handed alpha
Helix 134	134	G	298	302	Right-handed 310
Helix 135	135	G	306	319	Right-handed alpha
Helix 136	136	G	321	339	Right-handed alpha
Helix 137	137	G	344	359	Right-handed alpha
Helix 138	138	H	5	10	Right-handed alpha
Helix 139	139	H	14	18	Right-handed 310
Helix 140	140	H	21	34	Right-handed alpha
Helix 141	141	H	50	64	Right-handed alpha
Helix 142	142	H	76	84	Right-handed alpha
Helix 143	143	H	100	110	Right-handed alpha
Helix 144	144	H	128	131	Right-handed 310
Helix 145	145	H	132	139	Right-handed alpha
Helix 146	146	H	139	145	Right-handed alpha
Helix 147	147	H	158	162	Right-handed 310
Helix 148	148	H	163	168	Right-handed alpha
Helix 149	149	H	179	194	Right-handed alpha
Helix 150	150	H	199	210	Right-handed alpha
Helix 151	151	H	213	229	Right-handed alpha
Helix 152	152	H	233	242	Right-handed alpha
Helix 153	153	H	246	258	Right-handed alpha
Helix 154	154	H	260	274	Right-handed alpha
Helix 155	155	H	277	298	Right-handed alpha
Helix 156	156	H	299	302	Right-handed 310
Helix 157	157	H	309	320	Right-handed alpha
Helix 158	158	H	321	339	Right-handed alpha
Helix 159	159	H	344	359	Right-handed alpha
Helix 160	160	I	5	10	Right-handed alpha
Helix 161	161	I	14	18	Right-handed 310
Helix 162	162	I	21	35	Right-handed alpha
Helix 163	163	I	50	64	Right-handed alpha
Helix 164	164	I	76	84	Right-handed alpha
Helix 165	165	I	100	110	Right-handed alpha
Helix 166	166	I	128	131	Right-handed 310
Helix 167	167	I	132	145	Right-handed alpha
Helix 168	168	I	158	162	Right-handed 310
Helix 169	169	I	163	168	Right-handed alpha
Helix 170	170	I	179	194	Right-handed alpha
Helix 171	171	I	199	210	Right-handed alpha
Helix 172	172	I	213	228	Right-handed alpha
Helix 173	173	I	233	241	Right-handed alpha
Helix 174	174	I	246	258	Right-handed alpha
Helix 175	175	I	260	275	Right-handed alpha
Helix 176	176	I	277	296	Right-handed alpha
Helix 177	177	I	298	302	Right-handed 310
Helix 178	178	I	303	307	Right-handed 310
Helix 179	179	I	309	320	Right-handed alpha
Helix 180	180	I	321	338	Right-handed alpha
Helix 181	181	I	339	342	Right-handed 310
Helix 182	182	I	345	358	Right-handed alpha
Helix 183	183	J	6	21	Right-handed alpha
Helix 184	184	J	36	50	Right-handed alpha
Helix 185	185	J	62	70	Right-handed alpha
Helix 186	186	J	89	100	Right-handed alpha
Helix 187	187	J	116	120	Right-handed 310
Helix 188	188	J	121	134	Right-handed alpha
Helix 189	189	J	147	151	Right-handed 310
Helix 190	190	J	152	157	Right-handed alpha
Helix 191	191	J	168	178	Right-handed alpha
Helix 192	192	J	183	194	Right-handed alpha
Helix 193	193	J	199	207	Right-handed alpha
Helix 194	194	J	208	227	Right-handed alpha
Helix 195	195	J	229	231	Right-handed 310
Helix 196	196	J	232	237	Right-handed alpha
Helix 197	197	J	240	259	Right-handed alpha
Helix 198	198	J	270	281	Right-handed alpha
Helix 199	199	J	282	303	Right-handed alpha
Helix 200	200	J	307	324	Right-handed alpha

There are 13 sheets in PDB entry 3GLF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	4	first strand
Strand 2	A	134	139	parallel
Strand 3	A	20	25	parallel
Strand 4	A	108	114	parallel
Strand 5	A	78	83	parallel
Strand 6	A	49	51	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	196	197	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	94	first strand
Strand 2	B	121	126	parallel
Strand 3	B	150	155	parallel
Strand 4	B	40	44	parallel
Strand 5	B	171	174	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	198	first strand
Strand 2	B	231	232	parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	94	first strand
Strand 2	C	121	126	parallel
Strand 3	C	150	156	parallel
Strand 4	C	40	44	parallel
Strand 5	C	171	174	parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	94	first strand
Strand 2	D	121	126	parallel
Strand 3	D	150	156	parallel
Strand 4	D	40	44	parallel
Strand 5	D	171	174	parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	79	first strand
Strand 2	E	110	114	parallel
Strand 3	E	139	145	parallel
Strand 4	E	26	31	parallel
Strand 5	E	160	164	parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	2	4	first strand
Strand 2	F	134	139	parallel
Strand 3	F	20	25	parallel
Strand 4	F	108	114	parallel
Strand 5	F	78	83	parallel
Strand 6	F	49	51	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	162	first strand
Strand 2	F	196	197	parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	94	first strand
Strand 2	G	121	126	parallel
Strand 3	G	150	155	parallel
Strand 4	G	40	44	parallel
Strand 5	G	171	174	parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	94	first strand
Strand 2	H	121	126	parallel
Strand 3	H	150	156	parallel
Strand 4	H	40	44	parallel
Strand 5	H	171	174	parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	90	94	first strand
Strand 2	I	121	126	parallel
Strand 3	I	150	156	parallel
Strand 4	I	40	44	parallel
Strand 5	I	171	174	parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	76	79	first strand
Strand 2	J	110	114	parallel
Strand 3	J	139	145	parallel
Strand 4	J	26	31	parallel
Strand 5	J	160	164	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3GLF

Analysis of interatomic Contacts of Structural Units in PDB entry:
3GLF