Analysis of interatomic Contacts of Structural Units in PDB entry:
3GLL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GLL entry

There is 1 chain in PDB entry 3GLL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2ARG 545
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3GLL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 71Right-handed 310
Helix 2
2
A
85 97Right-handed alpha
Helix 3
3
A
99 103Right-handed 310
Helix 4
4
A
125 142Right-handed alpha
Helix 5
5
A
166 171Right-handed alpha
Helix 6
6
A
197 212Right-handed alpha
Helix 7
7
A
212 227Right-handed alpha
Helix 8
8
A
262 270Right-handed alpha
Helix 9
9
A
298 311Right-handed alpha
Helix 10
10
A
358 362Right-handed 310
Helix 11
11
A
383 387Right-handed 310
Helix 12
12
A
399 413Right-handed alpha
Helix 13
13
A
437 454Right-handed alpha
Helix 14
14
A
482 483Right-handed 310
Helix 15
15
A
485 487Right-handed 310
Helix 16
16
A
515 541Right-handed alpha
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There are 4 sheets in PDB entry 3GLL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 11first strand
Strand 2
A
14 20anti-parallel
Strand 3
A
29 35anti-parallel
Strand 4
A
38 46anti-parallel
Strand 5
A
111 119anti-parallel
Strand 6
A
59 65parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 163first strand
Strand 2
A
150 157anti-parallel
Strand 3
A
177 181anti-parallel
Strand 4
A
186 196anti-parallel
Strand 5
A
502 509anti-parallel
Strand 6
A
491 497anti-parallel
Strand 7
A
462 470anti-parallel
Strand 8
A
475 479anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 331first strand
Strand 2
A
339 345anti-parallel
Strand 3
A
348 357anti-parallel
Strand 4
A
424 433anti-parallel
Strand 5
A
376 381parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 366first strand
Strand 2
A
371 374anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il