Analysis of interatomic Contacts of Structural Units in PDB entry:
3GO9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GO9 entry

There is 1 chain in PDB entry 3GO9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8ALA 473
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 3GO9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
66 70Right-handed 310
Helix 2
2
A
71 75Right-handed 310
Helix 3
3
A
76 88Right-handed alpha
Helix 4
4
A
93 103Right-handed alpha
Helix 5
5
A
131 148Right-handed alpha
Helix 6
6
A
152 161Right-handed alpha
Helix 7
7
A
176 183Right-handed alpha
Helix 8
8
A
202 214Right-handed alpha
Helix 9
9
A
215 217Right-handed 310
Helix 10
10
A
228 241Right-handed alpha
Helix 11
11
A
289 317Right-handed alpha
Helix 12
12
A
344 346Right-handed 310
Helix 13
13
A
347 366Right-handed alpha
Helix 14
14
A
368 385Right-handed alpha
Helix 15
15
A
385 392Right-handed alpha
Helix 16
16
A
394 409Right-handed alpha
Helix 17
17
A
414 429Right-handed alpha
Helix 18
18
A
430 443Right-handed alpha
Helix 19
19
A
460 473Right-handed alpha
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There are 2 sheets in PDB entry 3GO9. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
43 48anti-parallel
Strand 3
A
219 225parallel
Strand 4
A
57 63anti-parallel
Strand 5
A
121 127anti-parallel
Strand 6
A
114 116anti-parallel
Strand 7
A
167 169parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 268first strand
Strand 2
A
447 453parallel
Strand 3
A
274 283anti-parallel
Strand 4
A
334 343anti-parallel
Strand 5
A
323 331anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il