Analysis of interatomic Contacts of Structural Units in PDB entry:
3GON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GON entry

There is 1 chain in PDB entry 3GON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 3GON. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
63 80Right-handed alpha
Helix 3
3
A
105 122Right-handed alpha
Helix 4
4
A
127 142Right-handed alpha
Helix 5
5
A
148 157Right-handed alpha
Helix 6
6
A
166 177Right-handed alpha
Helix 7
7
A
178 185Right-handed alpha
Helix 8
8
A
212 221Right-handed alpha
Helix 9
9
A
222 224Right-handed 310
Helix 10
10
A
225 246Right-handed alpha
Helix 11
11
A
247 266Right-handed alpha
Helix 12
12
A
271 280Right-handed alpha
Helix 13
13
A
305 319Right-handed alpha
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There are 4 sheets in PDB entry 3GON. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 13first strand
Strand 2
A
24 40anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
45 48parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 13first strand
Strand 2
A
24 40anti-parallel
Strand 3
A
160 163anti-parallel
Strand 4
A
190 193anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
100 101anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 290first strand
Strand 2
A
298 303anti-parallel
Strand 3
A
200 206anti-parallel
Strand 4
A
322 329anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il