Analysis of interatomic Contacts of Structural Units in PDB entry:
3GR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GR6 entry

There are 4 chains in PDB entry 3GR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 2LYS 256
D
 LEU -3LYS 256
G
 ASN 3LYS 256
J
 LEU -3LYS 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3GR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
41 52Right-handed alpha
Helix 3
3
A
69 85Right-handed alpha
Helix 4
4
A
98 104Right-handed alpha
Helix 5
5
A
105 109Right-handed 310
Helix 6
6
A
110 122Right-handed alpha
Helix 7
7
A
122 134Right-handed alpha
Helix 8
8
A
147 151Right-handed 310
Helix 9
9
A
158 179Right-handed alpha
Helix 10
10
A
197 201Right-handed 310
Helix 11
11
A
203 215Right-handed alpha
Helix 12
12
A
222 235Right-handed alpha
Helix 13
13
A
236 239Right-handed 310
Helix 14
14
A
251 255Right-handed 310
Helix 15
15
D
19 30Right-handed alpha
Helix 16
16
D
41 52Right-handed alpha
Helix 17
17
D
69 85Right-handed alpha
Helix 18
18
D
105 109Right-handed 310
Helix 19
19
D
110 122Right-handed alpha
Helix 20
20
D
122 134Right-handed alpha
Helix 21
21
D
147 151Right-handed 310
Helix 22
22
D
158 179Right-handed alpha
Helix 23
23
D
196 201Right-handed 310
Helix 24
24
D
203 215Right-handed alpha
Helix 25
25
D
222 235Right-handed alpha
Helix 26
26
D
236 239Right-handed 310
Helix 27
27
D
251 255Right-handed 310
Helix 28
28
G
19 31Right-handed alpha
Helix 29
29
G
44 52Right-handed alpha
Helix 30
30
G
69 85Right-handed alpha
Helix 31
31
G
98 104Right-handed alpha
Helix 32
32
G
105 109Right-handed 310
Helix 33
33
G
110 122Right-handed alpha
Helix 34
34
G
122 134Right-handed alpha
Helix 35
35
G
147 151Right-handed 310
Helix 36
36
G
158 179Right-handed alpha
Helix 37
37
G
196 201Right-handed 310
Helix 38
38
G
203 215Right-handed alpha
Helix 39
39
G
222 235Right-handed alpha
Helix 40
40
G
236 239Right-handed 310
Helix 41
41
G
251 255Right-handed 310
Helix 42
42
J
19 31Right-handed alpha
Helix 43
43
J
42 52Right-handed alpha
Helix 44
44
J
69 85Right-handed alpha
Helix 45
45
J
98 103Right-handed alpha
Helix 46
46
J
105 109Right-handed 310
Helix 47
47
J
110 122Right-handed alpha
Helix 48
48
J
122 133Right-handed alpha
Helix 49
49
J
134 136Right-handed 310
Helix 50
50
J
147 151Right-handed 310
Helix 51
51
J
157 179Right-handed alpha
Helix 52
52
J
196 201Right-handed 310
Helix 53
53
J
203 215Right-handed alpha
Helix 54
54
J
222 235Right-handed alpha
Helix 55
55
J
236 239Right-handed 310
Helix 56
56
J
251 255Right-handed 310
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There are 4 sheets in PDB entry 3GR6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
34 39parallel
Strand 3
A
8 12parallel
Strand 4
A
89 92parallel
Strand 5
A
140 146parallel
Strand 6
A
183 190parallel
Strand 7
A
245 248parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 64first strand
Strand 2
D
34 39parallel
Strand 3
D
8 12parallel
Strand 4
D
89 92parallel
Strand 5
D
140 146parallel
Strand 6
D
183 190parallel
Strand 7
D
245 248parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
62 64first strand
Strand 2
G
34 39parallel
Strand 3
G
8 12parallel
Strand 4
G
89 92parallel
Strand 5
G
140 146parallel
Strand 6
G
183 190parallel
Strand 7
G
245 248parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
62 64first strand
Strand 2
J
34 39parallel
Strand 3
J
8 12parallel
Strand 4
J
89 92parallel
Strand 5
J
140 146parallel
Strand 6
J
183 190parallel
Strand 7
J
245 248parallel
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