Analysis of interatomic Contacts of Structural Units in PDB entry:
3GU0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GU0 entry

There is 1 chain in PDB entry 3GU0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 406
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3GU0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 29Right-handed alpha
Helix 2
2
A
31 37Right-handed alpha
Helix 3
3
A
50 59Right-handed alpha
Helix 4
4
A
59 72Right-handed alpha
Helix 5
5
A
125 144Right-handed alpha
Helix 6
6
A
236 241Right-handed 310
Helix 7
7
A
248 256Right-handed alpha
Helix 8
8
A
259 279Right-handed alpha
Helix 9
9
A
288 307Right-handed alpha
Helix 10
10
A
312 316Right-handed 310
Helix 11
11
A
319 346Right-handed alpha
Helix 12
12
A
352 364Right-handed alpha
Helix 13
13
A
365 367Right-handed 310
Helix 14
14
A
370 381Right-handed alpha
Helix 15
15
A
381 402Right-handed alpha
Helix 16
16
A
403 405Right-handed 310
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There are 3 sheets in PDB entry 3GU0. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
13 19anti-parallel
Strand 3
A
98 107anti-parallel
Strand 4
A
83 95anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 113first strand
Strand 2
A
283 285anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 183first strand
Strand 2
A
159 168anti-parallel
Strand 3
A
215 227anti-parallel
Strand 4
A
204 210anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il