Analysis of interatomic Contacts of Structural Units in PDB entry:
3GUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GUW entry

There are 4 chains in PDB entry 3GUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 2VAL 248
B
 TYR 2VAL 248
C
 TYR 2VAL 248
D
 TYR 2VAL 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3GUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed 310
Helix 2
2
A
13 22Right-handed alpha
Helix 3
3
A
41 54Right-handed alpha
Helix 4
4
A
54 61Right-handed alpha
Helix 5
5
A
73 77Right-handed 310
Helix 6
6
A
81 89Right-handed alpha
Helix 7
7
A
105 123Right-handed alpha
Helix 8
8
A
136 149Right-handed alpha
Helix 9
9
A
165 171Right-handed alpha
Helix 10
10
A
192 197Right-handed 310
Helix 11
11
A
223 229Right-handed alpha
Helix 12
12
A
231 234Right-handed 310
Helix 13
13
A
235 240Right-handed alpha
Helix 14
14
A
241 246Right-handed alpha
Helix 15
15
B
8 12Right-handed 310
Helix 16
16
B
13 22Right-handed alpha
Helix 17
17
B
40 54Right-handed alpha
Helix 18
18
B
54 61Right-handed alpha
Helix 19
19
B
73 77Right-handed 310
Helix 20
20
B
81 89Right-handed alpha
Helix 21
21
B
105 123Right-handed alpha
Helix 22
22
B
136 149Right-handed alpha
Helix 23
23
B
165 171Right-handed alpha
Helix 24
24
B
192 197Right-handed 310
Helix 25
25
B
223 229Right-handed alpha
Helix 26
26
B
231 234Right-handed 310
Helix 27
27
B
235 240Right-handed alpha
Helix 28
28
B
241 246Right-handed alpha
Helix 29
29
C
8 12Right-handed 310
Helix 30
30
C
13 22Right-handed alpha
Helix 31
31
C
41 54Right-handed alpha
Helix 32
32
C
54 61Right-handed alpha
Helix 33
33
C
73 77Right-handed 310
Helix 34
34
C
81 89Right-handed alpha
Helix 35
35
C
105 123Right-handed alpha
Helix 36
36
C
136 149Right-handed alpha
Helix 37
37
C
165 171Right-handed alpha
Helix 38
38
C
192 197Right-handed 310
Helix 39
39
C
223 229Right-handed alpha
Helix 40
40
C
231 234Right-handed 310
Helix 41
41
C
235 240Right-handed alpha
Helix 42
42
C
241 246Right-handed alpha
Helix 43
43
D
8 12Right-handed 310
Helix 44
44
D
13 22Right-handed alpha
Helix 45
45
D
40 54Right-handed alpha
Helix 46
46
D
54 61Right-handed alpha
Helix 47
47
D
73 77Right-handed 310
Helix 48
48
D
81 89Right-handed alpha
Helix 49
49
D
105 123Right-handed alpha
Helix 50
50
D
136 149Right-handed alpha
Helix 51
51
D
165 171Right-handed alpha
Helix 52
52
D
192 197Right-handed 310
Helix 53
53
D
223 229Right-handed alpha
Helix 54
54
D
231 234Right-handed 310
Helix 55
55
D
235 240Right-handed alpha
Helix 56
56
D
241 246Right-handed alpha
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There are 8 sheets in PDB entry 3GUW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
65 66parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
126 129parallel
Strand 3
A
156 159parallel
Strand 4
A
175 179parallel
Strand 5
A
202 205parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 4first strand
Strand 2
B
27 28parallel
Strand 3
B
65 66parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 100first strand
Strand 2
B
126 129parallel
Strand 3
B
156 159parallel
Strand 4
B
175 179parallel
Strand 5
B
202 205parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 28first strand
Strand 2
C
65 66parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 100first strand
Strand 2
C
126 129parallel
Strand 3
C
156 159parallel
Strand 4
C
175 179parallel
Strand 5
C
202 205parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 4first strand
Strand 2
D
27 28parallel
Strand 3
D
65 66parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
96 100first strand
Strand 2
D
126 129parallel
Strand 3
D
156 159parallel
Strand 4
D
175 179parallel
Strand 5
D
202 205parallel
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