Analysis of interatomic Contacts of Structural Units in PDB entry:
3GUY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3GUY entry

There are 8 chains in PDB entry 3GUY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 1	ARG 220
B	LEU 1	GLU 221
C	LEU 1	GLU 221
D	LEU 1	GLY 222
E	LEU 1	ARG 220
F	LEU 1	ARG 220
G	LEU 1	HIS 228
H	LEU 1	ARG 220

There are 68 helices in PDB entry 3GUY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	9	22	Right-handed alpha
Helix 2	2	A	32	42	Right-handed alpha
Helix 3	3	A	56	66	Right-handed alpha
Helix 4	4	A	85	89	Right-handed 310
Helix 5	5	A	90	117	Right-handed alpha
Helix 6	6	A	128	132	Right-handed 310
Helix 7	7	A	138	159	Right-handed alpha
Helix 8	8	A	193	205	Right-handed alpha
Helix 9	9	B	9	22	Right-handed alpha
Helix 10	10	B	32	41	Right-handed alpha
Helix 11	11	B	56	66	Right-handed alpha
Helix 12	12	B	85	89	Right-handed 310
Helix 13	13	B	90	117	Right-handed alpha
Helix 14	14	B	128	132	Right-handed 310
Helix 15	15	B	138	159	Right-handed alpha
Helix 16	16	B	193	205	Right-handed alpha
Helix 17	17	C	9	22	Right-handed alpha
Helix 18	18	C	32	41	Right-handed alpha
Helix 19	19	C	56	66	Right-handed alpha
Helix 20	20	C	86	89	Right-handed 310
Helix 21	21	C	90	117	Right-handed alpha
Helix 22	22	C	128	132	Right-handed 310
Helix 23	23	C	138	159	Right-handed alpha
Helix 24	24	C	174	178	Right-handed 310
Helix 25	25	C	193	205	Right-handed alpha
Helix 26	26	D	9	22	Right-handed alpha
Helix 27	27	D	32	41	Right-handed alpha
Helix 28	28	D	56	66	Right-handed alpha
Helix 29	29	D	85	89	Right-handed 310
Helix 30	30	D	90	117	Right-handed alpha
Helix 31	31	D	128	132	Right-handed 310
Helix 32	32	D	138	159	Right-handed alpha
Helix 33	33	D	174	178	Right-handed 310
Helix 34	34	D	193	206	Right-handed alpha
Helix 35	35	E	9	22	Right-handed alpha
Helix 36	36	E	32	41	Right-handed alpha
Helix 37	37	E	56	66	Right-handed alpha
Helix 38	38	E	85	89	Right-handed 310
Helix 39	39	E	90	117	Right-handed alpha
Helix 40	40	E	128	132	Right-handed 310
Helix 41	41	E	138	159	Right-handed alpha
Helix 42	42	E	193	205	Right-handed alpha
Helix 43	43	F	9	22	Right-handed alpha
Helix 44	44	F	32	42	Right-handed alpha
Helix 45	45	F	56	66	Right-handed alpha
Helix 46	46	F	85	89	Right-handed 310
Helix 47	47	F	90	117	Right-handed alpha
Helix 48	48	F	128	132	Right-handed 310
Helix 49	49	F	138	159	Right-handed alpha
Helix 50	50	F	193	205	Right-handed alpha
Helix 51	51	G	9	22	Right-handed alpha
Helix 52	52	G	32	41	Right-handed alpha
Helix 53	53	G	56	66	Right-handed alpha
Helix 54	54	G	85	89	Right-handed 310
Helix 55	55	G	90	117	Right-handed alpha
Helix 56	56	G	128	132	Right-handed 310
Helix 57	57	G	138	159	Right-handed alpha
Helix 58	58	G	174	178	Right-handed 310
Helix 59	59	G	193	205	Right-handed alpha
Helix 60	60	H	9	22	Right-handed alpha
Helix 61	61	H	32	42	Right-handed alpha
Helix 62	62	H	56	66	Right-handed alpha
Helix 63	63	H	85	89	Right-handed 310
Helix 64	64	H	90	117	Right-handed alpha
Helix 65	65	H	128	132	Right-handed 310
Helix 66	66	H	138	159	Right-handed alpha
Helix 67	67	H	174	178	Right-handed 310
Helix 68	68	H	193	205	Right-handed alpha

There are 12 sheets in PDB entry 3GUY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	51	first strand
Strand 2	A	26	30	parallel
Strand 3	A	2	5	parallel
Strand 4	A	73	76	parallel
Strand 5	A	122	126	parallel
Strand 6	A	165	171	parallel
Strand 7	A	211	219	parallel
Strand 8	A	207	208	anti-parallel

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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	49	51	first strand
Strand 2	A	26	30	parallel
Strand 3	A	2	5	parallel
Strand 4	A	73	76	parallel
Strand 5	A	122	126	parallel
Strand 6	A	165	171	parallel
Strand 7	A	211	219	parallel
Strand 8	D	212	220	anti-parallel
Strand 9	D	165	172	parallel
Strand 10	D	122	126	parallel
Strand 11	D	73	76	parallel
Strand 12	D	2	5	parallel
Strand 13	D	26	30	parallel
Strand 14	D	49	51	parallel

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There are 14 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	26	30	parallel
Strand 3	B	2	5	parallel
Strand 4	B	73	76	parallel
Strand 5	B	122	126	parallel
Strand 6	B	165	171	parallel
Strand 7	B	211	220	parallel
Strand 8	C	211	220	anti-parallel
Strand 9	C	165	171	parallel
Strand 10	C	122	126	parallel
Strand 11	C	73	76	parallel
Strand 12	C	2	5	parallel
Strand 13	C	26	30	parallel
Strand 14	C	49	51	parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	26	30	parallel
Strand 3	B	2	5	parallel
Strand 4	B	73	76	parallel
Strand 5	B	122	126	parallel
Strand 6	B	165	171	parallel
Strand 7	B	211	220	parallel
Strand 8	C	211	220	anti-parallel
Strand 9	C	207	208	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	84	first strand
Strand 2	G	182	184	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	51	first strand
Strand 2	E	26	30	parallel
Strand 3	E	2	5	parallel
Strand 4	E	73	76	parallel
Strand 5	E	122	126	parallel
Strand 6	E	165	171	parallel
Strand 7	E	215	218	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	207	208	first strand
Strand 2	E	211	212	anti-parallel

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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	49	51	first strand
Strand 2	F	26	30	parallel
Strand 3	F	2	5	parallel
Strand 4	F	73	76	parallel
Strand 5	F	122	126	parallel
Strand 6	F	165	171	parallel
Strand 7	F	215	218	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	207	208	first strand
Strand 2	F	211	212	anti-parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	49	51	first strand
Strand 2	G	26	30	parallel
Strand 3	G	2	4	parallel
Strand 4	G	73	76	parallel
Strand 5	G	122	126	parallel
Strand 6	G	165	172	parallel
Strand 7	G	215	219	parallel

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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	49	51	first strand
Strand 2	H	26	30	parallel
Strand 3	H	2	5	parallel
Strand 4	H	73	76	parallel
Strand 5	H	122	126	parallel
Strand 6	H	165	171	parallel
Strand 7	H	215	218	parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	207	208	first strand
Strand 2	H	211	212	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3GUY

Analysis of interatomic Contacts of Structural Units in PDB entry:
3GUY