Analysis of interatomic Contacts of Structural Units in PDB entry:
3GV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GV0 entry

There is 1 chain in PDB entry 3GV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 65SER 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3GV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
81 95Right-handed alpha
Helix 2
2
A
108 112Right-handed 310
Helix 3
3
A
113 123Right-handed alpha
Helix 4
4
A
137 146Right-handed alpha
Helix 5
5
A
168 183Right-handed alpha
Helix 6
6
A
197 214Right-handed alpha
Helix 7
7
A
229 241Right-handed alpha
Helix 8
8
A
254 267Right-handed alpha
Helix 9
9
A
286 291Right-handed alpha
Helix 10
10
A
300 317Right-handed alpha
Helix 11
11
A
320 323Right-handed 310
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There are 2 sheets in PDB entry 3GV0. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
68 72parallel
Strand 3
A
127 131parallel
Strand 4
A
150 153parallel
Strand 5
A
163 167parallel
Strand 6
A
325 328parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
187 191parallel
Strand 3
A
249 252parallel
Strand 4
A
277 282parallel
Strand 5
A
295 298parallel
Strand 6
A
331 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il