Analysis of interatomic Contacts of Structural Units in PDB entry:
3GWC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GWC entry

There are 8 chains in PDB entry 3GWC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ALA 247
B
 ALA 2SER 244
C
 ALA 2SER 244
D
 GLU 3SER 244
E
 ALA 2PRO 245
F
 GLU 3SER 244
G
 GLU 3ALA 247
H
 GLU 3PRO 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 94 helices in PDB entry 3GWC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 45Right-handed alpha
Helix 2
2
A
51 55Right-handed 310
Helix 3
3
A
56 67Right-handed alpha
Helix 4
4
A
69 75Right-handed 310
Helix 5
5
A
87 94Right-handed alpha
Helix 6
6
A
119 123Right-handed 310
Helix 7
7
A
125 155Right-handed alpha
Helix 8
8
A
159 172Right-handed alpha
Helix 9
9
A
173 175Right-handed 310
Helix 10
10
A
189 200Right-handed alpha
Helix 11
11
A
205 223Right-handed alpha
Helix 12
12
B
30 45Right-handed alpha
Helix 13
13
B
51 55Right-handed 310
Helix 14
14
B
56 67Right-handed alpha
Helix 15
15
B
69 75Right-handed 310
Helix 16
16
B
87 94Right-handed alpha
Helix 17
17
B
119 123Right-handed 310
Helix 18
18
B
125 154Right-handed alpha
Helix 19
19
B
159 172Right-handed alpha
Helix 20
20
B
173 175Right-handed 310
Helix 21
21
B
189 200Right-handed alpha
Helix 22
22
B
205 223Right-handed alpha
Helix 23
23
B
223 228Right-handed alpha
Helix 24
24
C
30 43Right-handed alpha
Helix 25
25
C
51 55Right-handed 310
Helix 26
26
C
56 68Right-handed alpha
Helix 27
27
C
69 75Right-handed 310
Helix 28
28
C
87 94Right-handed alpha
Helix 29
29
C
119 123Right-handed 310
Helix 30
30
C
125 154Right-handed alpha
Helix 31
31
C
159 172Right-handed alpha
Helix 32
32
C
173 175Right-handed 310
Helix 33
33
C
189 200Right-handed alpha
Helix 34
34
C
205 223Right-handed alpha
Helix 35
35
C
223 228Right-handed alpha
Helix 36
36
D
30 45Right-handed alpha
Helix 37
37
D
51 55Right-handed 310
Helix 38
38
D
56 67Right-handed alpha
Helix 39
39
D
69 75Right-handed 310
Helix 40
40
D
87 94Right-handed alpha
Helix 41
41
D
119 123Right-handed 310
Helix 42
42
D
125 154Right-handed alpha
Helix 43
43
D
159 172Right-handed alpha
Helix 44
44
D
173 175Right-handed 310
Helix 45
45
D
189 200Right-handed alpha
Helix 46
46
D
205 223Right-handed alpha
Helix 47
47
D
223 228Right-handed alpha
Helix 48
48
E
30 43Right-handed alpha
Helix 49
49
E
51 55Right-handed 310
Helix 50
50
E
56 67Right-handed alpha
Helix 51
51
E
69 75Right-handed 310
Helix 52
52
E
87 94Right-handed alpha
Helix 53
53
E
119 123Right-handed 310
Helix 54
54
E
125 154Right-handed alpha
Helix 55
55
E
159 172Right-handed alpha
Helix 56
56
E
173 175Right-handed 310
Helix 57
57
E
189 200Right-handed alpha
Helix 58
58
E
205 223Right-handed alpha
Helix 59
59
E
223 228Right-handed alpha
Helix 60
60
F
30 45Right-handed alpha
Helix 61
61
F
56 67Right-handed alpha
Helix 62
62
F
69 75Right-handed 310
Helix 63
63
F
87 94Right-handed alpha
Helix 64
64
F
119 123Right-handed 310
Helix 65
65
F
125 154Right-handed alpha
Helix 66
66
F
155 157Right-handed 310
Helix 67
67
F
159 172Right-handed alpha
Helix 68
68
F
173 175Right-handed 310
Helix 69
69
F
189 200Right-handed alpha
Helix 70
70
F
205 223Right-handed alpha
Helix 71
71
F
223 228Right-handed alpha
Helix 72
72
G
30 45Right-handed alpha
Helix 73
73
G
56 67Right-handed alpha
Helix 74
74
G
69 75Right-handed 310
Helix 75
75
G
87 94Right-handed alpha
Helix 76
76
G
119 123Right-handed 310
Helix 77
77
G
125 154Right-handed alpha
Helix 78
78
G
155 157Right-handed 310
Helix 79
79
G
159 172Right-handed alpha
Helix 80
80
G
173 175Right-handed 310
Helix 81
81
G
189 200Right-handed alpha
Helix 82
82
G
205 223Right-handed alpha
Helix 83
83
H
30 45Right-handed alpha
Helix 84
84
H
51 55Right-handed 310
Helix 85
85
H
56 67Right-handed alpha
Helix 86
86
H
69 75Right-handed 310
Helix 87
87
H
87 94Right-handed alpha
Helix 88
88
H
119 123Right-handed 310
Helix 89
89
H
125 154Right-handed alpha
Helix 90
90
H
159 172Right-handed alpha
Helix 91
91
H
173 175Right-handed 310
Helix 92
92
H
189 200Right-handed alpha
Helix 93
93
H
205 223Right-handed alpha
Helix 94
94
H
223 228Right-handed alpha
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There are 12 sheets in PDB entry 3GWC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 103first strand
Strand 2
A
180 188anti-parallel
Strand 3
A
77 86anti-parallel
Strand 4
A
8 17anti-parallel
Strand 5
C
8 17anti-parallel
Strand 6
C
77 86anti-parallel
Strand 7
C
180 188anti-parallel
Strand 8
C
100 103anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 234first strand
Strand 2
A
240 243anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 103first strand
Strand 2
B
180 188anti-parallel
Strand 3
B
77 86anti-parallel
Strand 4
B
8 17anti-parallel
Strand 5
D
8 17anti-parallel
Strand 6
D
77 86anti-parallel
Strand 7
D
180 188anti-parallel
Strand 8
D
100 103anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
231 234first strand
Strand 2
B
240 243anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
231 234first strand
Strand 2
C
240 243anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
231 234first strand
Strand 2
D
240 243anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
100 103first strand
Strand 2
E
180 188anti-parallel
Strand 3
E
77 86anti-parallel
Strand 4
E
8 17anti-parallel
Strand 5
G
8 17anti-parallel
Strand 6
G
77 86anti-parallel
Strand 7
G
180 188anti-parallel
Strand 8
G
100 103anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
231 234first strand
Strand 2
E
240 243anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 103first strand
Strand 2
F
180 188anti-parallel
Strand 3
F
77 86anti-parallel
Strand 4
F
8 17anti-parallel
Strand 5
H
8 17anti-parallel
Strand 6
H
77 86anti-parallel
Strand 7
H
180 188anti-parallel
Strand 8
H
100 103anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
231 234first strand
Strand 2
F
240 243anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
231 234first strand
Strand 2
G
240 243anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
231 234first strand
Strand 2
H
240 243anti-parallel
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