Analysis of interatomic Contacts of Structural Units in PDB entry:
3GXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GXG entry

There are 4 chains in PDB entry 3GXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0HIS 178
B
 GLY 0HIS 178
C
 GLY 0HIS 178
D
 GLY 0HIS 178
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3GXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 31Right-handed 310
Helix 2
2
A
50 60Right-handed alpha
Helix 3
3
A
79 87Right-handed alpha
Helix 4
4
A
102 115Right-handed alpha
Helix 5
5
A
128 142Right-handed alpha
Helix 6
6
A
147 152Right-handed alpha
Helix 7
7
A
153 156Right-handed 310
Helix 8
8
A
158 161Right-handed 310
Helix 9
9
A
162 175Right-handed alpha
Helix 10
10
B
26 31Right-handed 310
Helix 11
11
B
53 60Right-handed alpha
Helix 12
12
B
79 87Right-handed alpha
Helix 13
13
B
102 115Right-handed alpha
Helix 14
14
B
128 142Right-handed alpha
Helix 15
15
B
147 152Right-handed alpha
Helix 16
16
B
153 156Right-handed 310
Helix 17
17
B
158 161Right-handed 310
Helix 18
18
B
162 175Right-handed alpha
Helix 19
19
C
26 31Right-handed 310
Helix 20
20
C
50 60Right-handed alpha
Helix 21
21
C
79 87Right-handed alpha
Helix 22
22
C
102 115Right-handed alpha
Helix 23
23
C
128 142Right-handed alpha
Helix 24
24
C
147 152Right-handed alpha
Helix 25
25
C
153 156Right-handed 310
Helix 26
26
C
158 161Right-handed 310
Helix 27
27
C
162 174Right-handed alpha
Helix 28
28
D
26 31Right-handed 310
Helix 29
29
D
50 60Right-handed alpha
Helix 30
30
D
79 87Right-handed alpha
Helix 31
31
D
102 115Right-handed alpha
Helix 32
32
D
128 142Right-handed alpha
Helix 33
33
D
147 152Right-handed alpha
Helix 34
34
D
153 156Right-handed 310
Helix 35
35
D
158 161Right-handed 310
Helix 36
36
D
162 175Right-handed alpha
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There are 4 sheets in PDB entry 3GXG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
121 124parallel
Strand 4
A
64 67parallel
Strand 5
A
90 93parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 40first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
121 124parallel
Strand 4
B
64 67parallel
Strand 5
B
90 93parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
37 40first strand
Strand 2
C
43 46anti-parallel
Strand 3
C
121 124parallel
Strand 4
C
64 67parallel
Strand 5
C
90 93parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 40first strand
Strand 2
D
43 46anti-parallel
Strand 3
D
121 124parallel
Strand 4
D
64 67parallel
Strand 5
D
90 93parallel
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