Analysis of interatomic Contacts of Structural Units in PDB entry:
3GYR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GYR entry

There are 12 chains in PDB entry 3GYR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 37ASP 628
B
 ALA 37ASP 628
C
 ALA 37ASP 628
D
 ALA 37ASP 628
E
 ALA 37ASP 628
F
 ALA 37ASP 628
G
 ALA 37ASP 628
H
 ALA 37ASP 628
I
 ALA 37ASP 628
J
 ALA 37ASP 628
K
 ALA 37ASP 628
L
 ALA 37ASP 628
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are105 helices in PDB entry 3GYR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
135 139Right-handed 310
Helix 2
2
A
148 153Right-handed alpha
Helix 3
3
A
174 178Right-handed 310
Helix 4
4
A
207 212Right-handed alpha
Helix 5
5
A
224 229Right-handed alpha
Helix 6
6
A
234 236Right-handed 310
Helix 7
7
A
395 399Right-handed 310
Helix 8
8
A
605 611Right-handed alpha
Helix 9
9
A
621 626Right-handed alpha
Helix 10
10
B
135 139Right-handed 310
Helix 11
11
B
148 153Right-handed alpha
Helix 12
12
B
207 212Right-handed alpha
Helix 13
13
B
224 229Right-handed alpha
Helix 14
14
B
234 236Right-handed 310
Helix 15
15
B
395 399Right-handed 310
Helix 16
16
B
605 610Right-handed alpha
Helix 17
17
B
621 626Right-handed alpha
Helix 18
18
C
135 139Right-handed 310
Helix 19
19
C
148 153Right-handed alpha
Helix 20
20
C
174 178Right-handed 310
Helix 21
21
C
207 212Right-handed alpha
Helix 22
22
C
224 229Right-handed alpha
Helix 23
23
C
234 236Right-handed 310
Helix 24
24
C
395 399Right-handed 310
Helix 25
25
C
605 611Right-handed alpha
Helix 26
26
C
621 626Right-handed alpha
Helix 27
27
D
135 139Right-handed 310
Helix 28
28
D
148 153Right-handed alpha
Helix 29
29
D
168 172Right-handed 310
Helix 30
30
D
174 178Right-handed 310
Helix 31
31
D
207 212Right-handed alpha
Helix 32
32
D
224 229Right-handed alpha
Helix 33
33
D
234 236Right-handed 310
Helix 34
34
D
395 399Right-handed 310
Helix 35
35
D
605 610Right-handed alpha
Helix 36
36
D
621 626Right-handed alpha
Helix 37
37
E
135 139Right-handed 310
Helix 38
38
E
148 153Right-handed alpha
Helix 39
39
E
207 214Right-handed alpha
Helix 40
40
E
224 229Right-handed alpha
Helix 41
41
E
234 236Right-handed 310
Helix 42
42
E
568 572Right-handed 310
Helix 43
43
E
605 610Right-handed alpha
Helix 44
44
E
621 626Right-handed alpha
Helix 45
45
F
135 139Right-handed 310
Helix 46
46
F
148 153Right-handed alpha
Helix 47
47
F
168 172Right-handed 310
Helix 48
48
F
207 215Right-handed alpha
Helix 49
49
F
224 229Right-handed alpha
Helix 50
50
F
234 236Right-handed 310
Helix 51
51
F
395 399Right-handed 310
Helix 52
52
F
605 610Right-handed alpha
Helix 53
53
F
621 626Right-handed alpha
Helix 54
54
G
135 139Right-handed 310
Helix 55
55
G
148 153Right-handed alpha
Helix 56
56
G
168 172Right-handed 310
Helix 57
57
G
207 214Right-handed alpha
Helix 58
58
G
224 229Right-handed alpha
Helix 59
59
G
234 236Right-handed 310
Helix 60
60
G
395 399Right-handed 310
Helix 61
61
G
605 611Right-handed alpha
Helix 62
62
G
621 626Right-handed alpha
Helix 63
63
H
135 139Right-handed 310
Helix 64
64
H
148 153Right-handed alpha
Helix 65
65
H
174 178Right-handed 310
Helix 66
66
H
207 212Right-handed alpha
Helix 67
67
H
224 229Right-handed alpha
Helix 68
68
H
234 236Right-handed 310
Helix 69
69
H
395 399Right-handed 310
Helix 70
70
H
605 611Right-handed alpha
Helix 71
71
H
621 626Right-handed alpha
Helix 72
72
I
135 139Right-handed 310
Helix 73
73
I
148 153Right-handed alpha
Helix 74
74
I
207 212Right-handed alpha
Helix 75
75
I
224 229Right-handed alpha
Helix 76
76
I
234 236Right-handed 310
Helix 77
77
I
605 611Right-handed alpha
Helix 78
78
I
621 626Right-handed alpha
Helix 79
79
J
135 139Right-handed 310
Helix 80
80
J
148 153Right-handed alpha
Helix 81
81
J
168 172Right-handed 310
Helix 82
82
J
174 178Right-handed 310
Helix 83
83
J
207 212Right-handed alpha
Helix 84
84
J
224 229Right-handed alpha
Helix 85
85
J
234 236Right-handed 310
Helix 86
86
J
395 399Right-handed 310
Helix 87
87
J
605 610Right-handed alpha
Helix 88
88
J
621 626Right-handed alpha
Helix 89
89
K
135 139Right-handed 310
Helix 90
90
K
148 153Right-handed alpha
Helix 91
91
K
174 178Right-handed 310
Helix 92
92
K
207 212Right-handed alpha
Helix 93
93
K
224 229Right-handed alpha
Helix 94
94
K
234 236Right-handed 310
Helix 95
95
K
605 610Right-handed alpha
Helix 96
96
K
621 626Right-handed alpha
Helix 97
97
L
135 139Right-handed 310
Helix 98
98
L
148 153Right-handed alpha
Helix 99
99
L
174 178Right-handed 310
Helix 100
100
L
207 214Right-handed alpha
Helix 101
101
L
224 230Right-handed alpha
Helix 102
102
L
234 236Right-handed 310
Helix 103
103
L
395 399Right-handed 310
Helix 104
104
L
605 611Right-handed alpha
Helix 105
105
L
621 626Right-handed alpha
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