Analysis of interatomic Contacts of Structural Units in PDB entry:
3GYU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GYU entry

There are 2 chains in PDB entry 3GYU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 512TYR 753
B
 LYS 742GLU 751
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3GYU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
515 529Right-handed alpha
Helix 2
2
A
530 532Right-handed 310
Helix 3
3
A
538 547Right-handed alpha
Helix 4
4
A
551 572Right-handed alpha
Helix 5
5
A
575 579Right-handed 310
Helix 6
6
A
580 603Right-handed alpha
Helix 7
7
A
624 629Right-handed 310
Helix 8
8
A
633 647Right-handed alpha
Helix 9
9
A
649 655Right-handed alpha
Helix 10
10
A
655 668Right-handed alpha
Helix 11
11
A
677 703Right-handed alpha
Helix 12
12
A
706 727Right-handed alpha
Helix 13
13
A
742 747Right-handed alpha
Helix 14
14
B
743 751Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3GYU.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 605first strand
Strand 2
A
610 612anti-parallel
Strand 3
A
620 622anti-parallel
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