Analysis of interatomic Contacts of Structural Units in PDB entry:
3GZN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3GZN entry

There are 6 chains in PDB entry 3GZN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 15LEU 541
B
 ASP 33THR 462
C
 LEU 14LEU 541
D
 ASP 33THR 462
I
 HIS -2GLY 76
J
 HIS -2GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 3GZN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 37Right-handed alpha
Helix 2
2
A
46 58Right-handed alpha
Helix 3
3
A
73 80Right-handed alpha
Helix 4
4
A
84 88Right-handed 310
Helix 5
5
A
91 101Right-handed alpha
Helix 6
6
A
102 104Right-handed 310
Helix 7
7
A
115 123Right-handed alpha
Helix 8
8
A
124 130Right-handed 310
Helix 9
9
A
139 153Right-handed alpha
Helix 10
10
A
196 205Right-handed alpha
Helix 11
11
A
220 237Right-handed alpha
Helix 12
12
A
243 257Right-handed alpha
Helix 13
13
A
269 279Right-handed alpha
Helix 14
14
A
289 297Right-handed alpha
Helix 15
15
A
298 303Right-handed alpha
Helix 16
16
A
309 324Right-handed alpha
Helix 17
17
A
342 376Right-handed alpha
Helix 18
18
A
383 393Right-handed alpha
Helix 19
19
A
394 396Right-handed 310
Helix 20
20
A
404 410Right-handed alpha
Helix 21
21
A
415 424Right-handed alpha
Helix 22
22
A
429 447Right-handed alpha
Helix 23
23
A
456 475Right-handed alpha
Helix 24
24
A
482 493Right-handed alpha
Helix 25
25
A
497 518Right-handed alpha
Helix 26
26
B
38 47Right-handed alpha
Helix 27
27
B
61 70Right-handed alpha
Helix 28
28
B
78 90Right-handed alpha
Helix 29
29
B
105 111Right-handed 310
Helix 30
30
B
116 120Right-handed 310
Helix 31
31
B
123 136Right-handed alpha
Helix 32
32
B
152 157Right-handed alpha
Helix 33
33
B
168 182Right-handed alpha
Helix 34
34
B
192 195Right-handed 310
Helix 35
35
B
224 228Right-handed 310
Helix 36
36
B
235 242Right-handed alpha
Helix 37
37
B
245 256Right-handed alpha
Helix 38
38
B
256 262Right-handed alpha
Helix 39
39
B
274 292Right-handed alpha
Helix 40
40
B
298 308Right-handed alpha
Helix 41
41
B
313 334Right-handed alpha
Helix 42
42
B
382 392Right-handed alpha
Helix 43
43
B
420 425Right-handed alpha
Helix 44
44
B
426 430Right-handed 310
Helix 45
45
C
15 20Right-handed alpha
Helix 46
46
C
20 37Right-handed alpha
Helix 47
47
C
46 58Right-handed alpha
Helix 48
48
C
73 80Right-handed alpha
Helix 49
49
C
84 88Right-handed 310
Helix 50
50
C
91 102Right-handed alpha
Helix 51
51
C
115 123Right-handed alpha
Helix 52
52
C
124 130Right-handed 310
Helix 53
53
C
139 153Right-handed alpha
Helix 54
54
C
196 205Right-handed alpha
Helix 55
55
C
207 211Right-handed 310
Helix 56
56
C
213 218Right-handed alpha
Helix 57
57
C
220 235Right-handed alpha
Helix 58
58
C
243 257Right-handed alpha
Helix 59
59
C
269 278Right-handed alpha
Helix 60
60
C
279 281Right-handed 310
Helix 61
61
C
289 297Right-handed alpha
Helix 62
62
C
298 303Right-handed alpha
Helix 63
63
C
309 324Right-handed alpha
Helix 64
64
C
342 376Right-handed alpha
Helix 65
65
C
378 382Right-handed 310
Helix 66
66
C
383 393Right-handed alpha
Helix 67
67
C
404 410Right-handed alpha
Helix 68
68
C
415 423Right-handed alpha
Helix 69
69
C
429 447Right-handed alpha
Helix 70
70
C
456 475Right-handed alpha
Helix 71
71
C
482 493Right-handed alpha
Helix 72
72
C
497 518Right-handed alpha
Helix 73
73
D
38 47Right-handed alpha
Helix 74
74
D
60 70Right-handed alpha
Helix 75
75
D
78 90Right-handed alpha
Helix 76
76
D
105 111Right-handed 310
Helix 77
77
D
116 120Right-handed 310
Helix 78
78
D
123 136Right-handed alpha
Helix 79
79
D
147 151Right-handed 310
Helix 80
80
D
152 158Right-handed alpha
Helix 81
81
D
168 183Right-handed alpha
Helix 82
82
D
192 195Right-handed 310
Helix 83
83
D
221 228Right-handed 310
Helix 84
84
D
235 241Right-handed alpha
Helix 85
85
D
245 256Right-handed alpha
Helix 86
86
D
256 262Right-handed alpha
Helix 87
87
D
274 292Right-handed alpha
Helix 88
88
D
298 307Right-handed alpha
Helix 89
89
D
313 334Right-handed alpha
Helix 90
90
D
382 392Right-handed alpha
Helix 91
91
D
418 426Right-handed alpha
Helix 92
92
D
427 430Right-handed 310
Helix 93
93
I
22 35Right-handed alpha
Helix 94
94
I
37 41Right-handed 310
Helix 95
95
I
56 60Right-handed 310
Helix 96
96
J
22 35Right-handed alpha
Helix 97
97
J
37 41Right-handed 310
Helix 98
98
J
56 60Right-handed 310
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There are 12 sheets in PDB entry 3GZN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
63 67parallel
Strand 3
A
39 43parallel
Strand 4
A
132 136parallel
Strand 5
A
157 163parallel
Strand 6
A
166 172anti-parallel
Strand 7
A
526 530anti-parallel
Strand 8
A
535 539anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
398 400anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
140 144first strand
Strand 2
B
95 99parallel
Strand 3
B
71 75parallel
Strand 4
B
161 165parallel
Strand 5
B
198 204parallel
Strand 6
B
207 213anti-parallel
Strand 7
B
342 346anti-parallel
Strand 8
B
352 356anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
189 190anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 376first strand
Strand 2
B
451 461parallel
Strand 3
B
443 448anti-parallel
Strand 4
B
401 405anti-parallel
Strand 5
B
410 414anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 112first strand
Strand 2
C
63 67parallel
Strand 3
C
39 43parallel
Strand 4
C
132 136parallel
Strand 5
C
157 163parallel
Strand 6
C
166 172anti-parallel
Strand 7
C
526 530anti-parallel
Strand 8
C
535 539anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 178first strand
Strand 2
C
398 400anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
140 145first strand
Strand 2
D
95 100parallel
Strand 3
D
71 75parallel
Strand 4
D
161 165parallel
Strand 5
D
198 204parallel
Strand 6
D
207 213anti-parallel
Strand 7
D
342 346anti-parallel
Strand 8
D
352 356anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
185 186first strand
Strand 2
D
189 190anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
372 376first strand
Strand 2
D
451 461parallel
Strand 3
D
443 448anti-parallel
Strand 4
D
401 405anti-parallel
Strand 5
D
410 414anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
12 17first strand
Strand 2
I
1 6anti-parallel
Strand 3
I
66 69parallel
Strand 4
I
43 45anti-parallel
Strand 5
I
48 49anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
12 17first strand
Strand 2
J
1 6anti-parallel
Strand 3
J
66 69parallel
Strand 4
J
43 45anti-parallel
Strand 5
J
48 49anti-parallel
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