Analysis of interatomic Contacts of Structural Units in PDB entry:
3GZT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3GZT entry

There are 13 chains in PDB entry 3GZT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 58	LYS 312
F	PRO 58	LYS 312
G	PRO 58	LYS 312
H	PRO 58	LYS 312
I	PRO 58	LYS 312
J	PRO 58	LYS 312
K	PRO 58	LYS 312
L	PRO 58	LYS 312
M	PRO 58	LYS 312
N	PRO 58	LYS 312
O	PRO 58	LYS 312
P	PRO 58	LYS 312
Q	PRO 58	LYS 312

There are104 helices in PDB entry 3GZT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	B	71	79	Right-handed alpha
Helix 2	2	B	87	94	Right-handed alpha
Helix 3	3	B	97	109	Right-handed alpha
Helix 4	4	B	112	114	Right-handed 310
Helix 5	5	B	123	130	Right-handed alpha
Helix 6	6	B	148	160	Right-handed alpha
Helix 7	7	B	291	302	Right-handed alpha
Helix 8	8	B	302	309	Right-handed alpha
Helix 9	9	F	71	79	Right-handed alpha
Helix 10	10	F	87	94	Right-handed alpha
Helix 11	11	F	97	109	Right-handed alpha
Helix 12	12	F	112	114	Right-handed 310
Helix 13	13	F	123	130	Right-handed alpha
Helix 14	14	F	148	160	Right-handed alpha
Helix 15	15	F	291	302	Right-handed alpha
Helix 16	16	F	302	309	Right-handed alpha
Helix 17	17	G	71	76	Right-handed alpha
Helix 18	18	G	87	94	Right-handed alpha
Helix 19	19	G	97	109	Right-handed alpha
Helix 20	20	G	112	114	Right-handed 310
Helix 21	21	G	123	130	Right-handed alpha
Helix 22	22	G	148	160	Right-handed alpha
Helix 23	23	G	291	302	Right-handed alpha
Helix 24	24	G	302	309	Right-handed alpha
Helix 25	25	H	71	79	Right-handed alpha
Helix 26	26	H	87	94	Right-handed alpha
Helix 27	27	H	97	109	Right-handed alpha
Helix 28	28	H	112	114	Right-handed 310
Helix 29	29	H	123	130	Right-handed alpha
Helix 30	30	H	148	160	Right-handed alpha
Helix 31	31	H	291	302	Right-handed alpha
Helix 32	32	H	302	309	Right-handed alpha
Helix 33	33	I	71	79	Right-handed alpha
Helix 34	34	I	87	94	Right-handed alpha
Helix 35	35	I	97	109	Right-handed alpha
Helix 36	36	I	112	114	Right-handed 310
Helix 37	37	I	123	130	Right-handed alpha
Helix 38	38	I	148	160	Right-handed alpha
Helix 39	39	I	291	302	Right-handed alpha
Helix 40	40	I	302	309	Right-handed alpha
Helix 41	41	J	71	79	Right-handed alpha
Helix 42	42	J	87	94	Right-handed alpha
Helix 43	43	J	97	109	Right-handed alpha
Helix 44	44	J	112	114	Right-handed 310
Helix 45	45	J	123	130	Right-handed alpha
Helix 46	46	J	148	160	Right-handed alpha
Helix 47	47	J	291	302	Right-handed alpha
Helix 48	48	J	302	309	Right-handed alpha
Helix 49	49	K	71	79	Right-handed alpha
Helix 50	50	K	87	94	Right-handed alpha
Helix 51	51	K	97	109	Right-handed alpha
Helix 52	52	K	112	114	Right-handed 310
Helix 53	53	K	123	130	Right-handed alpha
Helix 54	54	K	148	160	Right-handed alpha
Helix 55	55	K	291	302	Right-handed alpha
Helix 56	56	K	302	309	Right-handed alpha
Helix 57	57	L	71	79	Right-handed alpha
Helix 58	58	L	87	94	Right-handed alpha
Helix 59	59	L	97	109	Right-handed alpha
Helix 60	60	L	112	114	Right-handed 310
Helix 61	61	L	123	130	Right-handed alpha
Helix 62	62	L	148	160	Right-handed alpha
Helix 63	63	L	291	302	Right-handed alpha
Helix 64	64	L	302	309	Right-handed alpha
Helix 65	65	M	71	79	Right-handed alpha
Helix 66	66	M	87	94	Right-handed alpha
Helix 67	67	M	97	109	Right-handed alpha
Helix 68	68	M	112	114	Right-handed 310
Helix 69	69	M	123	130	Right-handed alpha
Helix 70	70	M	148	160	Right-handed alpha
Helix 71	71	M	291	302	Right-handed alpha
Helix 72	72	M	302	309	Right-handed alpha
Helix 73	73	N	71	79	Right-handed alpha
Helix 74	74	N	87	94	Right-handed alpha
Helix 75	75	N	97	109	Right-handed alpha
Helix 76	76	N	112	114	Right-handed 310
Helix 77	77	N	123	130	Right-handed alpha
Helix 78	78	N	148	160	Right-handed alpha
Helix 79	79	N	291	302	Right-handed alpha
Helix 80	80	N	302	309	Right-handed alpha
Helix 81	81	O	71	79	Right-handed alpha
Helix 82	82	O	87	94	Right-handed alpha
Helix 83	83	O	97	109	Right-handed alpha
Helix 84	84	O	112	114	Right-handed 310
Helix 85	85	O	123	130	Right-handed alpha
Helix 86	86	O	148	160	Right-handed alpha
Helix 87	87	O	291	302	Right-handed alpha
Helix 88	88	O	302	309	Right-handed alpha
Helix 89	89	P	71	79	Right-handed alpha
Helix 90	90	P	87	94	Right-handed alpha
Helix 91	91	P	97	109	Right-handed alpha
Helix 92	92	P	112	114	Right-handed 310
Helix 93	93	P	123	130	Right-handed alpha
Helix 94	94	P	148	160	Right-handed alpha
Helix 95	95	P	291	302	Right-handed alpha
Helix 96	96	P	302	309	Right-handed alpha
Helix 97	97	Q	71	79	Right-handed alpha
Helix 98	98	Q	87	94	Right-handed alpha
Helix 99	99	Q	97	109	Right-handed alpha
Helix 100	100	Q	112	114	Right-handed 310
Helix 101	101	Q	123	130	Right-handed alpha
Helix 102	102	Q	148	160	Right-handed alpha
Helix 103	103	Q	291	302	Right-handed alpha
Helix 104	104	Q	302	309	Right-handed alpha

There are 39 sheets in PDB entry 3GZT. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	121	first strand
Strand 2	B	81	86	parallel
Strand 3	B	137	143	parallel
Strand 4	B	260	263	parallel
Strand 5	B	284	287	parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	167	first strand
Strand 2	B	244	250	anti-parallel
Strand 3	B	182	198	anti-parallel
Strand 4	B	216	227	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	167	first strand
Strand 2	B	244	250	anti-parallel
Strand 3	B	182	198	anti-parallel
Strand 4	B	234	238	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	121	first strand
Strand 2	F	81	86	parallel
Strand 3	F	137	143	parallel
Strand 4	F	260	263	parallel
Strand 5	F	284	287	parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	164	167	first strand
Strand 2	F	244	250	anti-parallel
Strand 3	F	182	198	anti-parallel
Strand 4	F	216	227	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	164	167	first strand
Strand 2	F	244	250	anti-parallel
Strand 3	F	182	198	anti-parallel
Strand 4	F	234	238	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	116	121	first strand
Strand 2	G	81	86	parallel
Strand 3	G	137	143	parallel
Strand 4	G	260	263	parallel
Strand 5	G	284	287	parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	164	167	first strand
Strand 2	G	244	250	anti-parallel
Strand 3	G	182	198	anti-parallel
Strand 4	G	216	227	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	164	167	first strand
Strand 2	G	244	250	anti-parallel
Strand 3	G	182	198	anti-parallel
Strand 4	G	234	238	anti-parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	116	121	first strand
Strand 2	H	81	86	parallel
Strand 3	H	137	143	parallel
Strand 4	H	260	263	parallel
Strand 5	H	284	287	parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	164	167	first strand
Strand 2	H	244	250	anti-parallel
Strand 3	H	182	198	anti-parallel
Strand 4	H	216	227	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	164	167	first strand
Strand 2	H	244	250	anti-parallel
Strand 3	H	182	198	anti-parallel
Strand 4	H	234	238	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	116	121	first strand
Strand 2	I	81	86	parallel
Strand 3	I	137	143	parallel
Strand 4	I	260	263	parallel
Strand 5	I	284	287	parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	164	167	first strand
Strand 2	I	244	250	anti-parallel
Strand 3	I	182	198	anti-parallel
Strand 4	I	216	227	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	164	167	first strand
Strand 2	I	244	250	anti-parallel
Strand 3	I	182	198	anti-parallel
Strand 4	I	234	238	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	116	121	first strand
Strand 2	J	81	86	parallel
Strand 3	J	137	143	parallel
Strand 4	J	260	263	parallel
Strand 5	J	284	287	parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	164	167	first strand
Strand 2	J	244	250	anti-parallel
Strand 3	J	182	198	anti-parallel
Strand 4	J	216	227	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	164	167	first strand
Strand 2	J	244	250	anti-parallel
Strand 3	J	182	198	anti-parallel
Strand 4	J	234	238	anti-parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	116	121	first strand
Strand 2	K	81	86	parallel
Strand 3	K	137	143	parallel
Strand 4	K	260	263	parallel
Strand 5	K	284	287	parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	164	167	first strand
Strand 2	K	244	250	anti-parallel
Strand 3	K	182	198	anti-parallel
Strand 4	K	216	227	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	164	167	first strand
Strand 2	K	244	250	anti-parallel
Strand 3	K	182	198	anti-parallel
Strand 4	K	234	238	anti-parallel

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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	116	121	first strand
Strand 2	L	81	86	parallel
Strand 3	L	137	143	parallel
Strand 4	L	260	263	parallel
Strand 5	L	284	287	parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	164	167	first strand
Strand 2	L	244	250	anti-parallel
Strand 3	L	182	198	anti-parallel
Strand 4	L	216	227	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	164	167	first strand
Strand 2	L	244	250	anti-parallel
Strand 3	L	182	198	anti-parallel
Strand 4	L	234	238	anti-parallel

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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	116	121	first strand
Strand 2	M	81	86	parallel
Strand 3	M	137	143	parallel
Strand 4	M	260	263	parallel
Strand 5	M	284	287	parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	164	167	first strand
Strand 2	M	244	250	anti-parallel
Strand 3	M	182	198	anti-parallel
Strand 4	M	216	227	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	164	167	first strand
Strand 2	M	244	250	anti-parallel
Strand 3	M	182	198	anti-parallel
Strand 4	M	234	238	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	116	121	first strand
Strand 2	N	81	86	parallel
Strand 3	N	137	143	parallel
Strand 4	N	260	263	parallel
Strand 5	N	284	287	parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	164	167	first strand
Strand 2	N	244	250	anti-parallel
Strand 3	N	182	198	anti-parallel
Strand 4	N	216	227	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	164	167	first strand
Strand 2	N	244	250	anti-parallel
Strand 3	N	182	198	anti-parallel
Strand 4	N	234	238	anti-parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	116	121	first strand
Strand 2	O	81	86	parallel
Strand 3	O	137	143	parallel
Strand 4	O	260	263	parallel
Strand 5	O	284	287	parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	164	167	first strand
Strand 2	O	244	250	anti-parallel
Strand 3	O	182	198	anti-parallel
Strand 4	O	216	227	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	164	167	first strand
Strand 2	O	244	250	anti-parallel
Strand 3	O	182	198	anti-parallel
Strand 4	O	234	238	anti-parallel

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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	116	121	first strand
Strand 2	P	81	86	parallel
Strand 3	P	137	143	parallel
Strand 4	P	260	263	parallel
Strand 5	P	284	287	parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	164	167	first strand
Strand 2	P	244	250	anti-parallel
Strand 3	P	182	198	anti-parallel
Strand 4	P	216	227	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	164	167	first strand
Strand 2	P	244	250	anti-parallel
Strand 3	P	182	198	anti-parallel
Strand 4	P	234	238	anti-parallel

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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	116	121	first strand
Strand 2	Q	81	86	parallel
Strand 3	Q	137	143	parallel
Strand 4	Q	260	263	parallel
Strand 5	Q	284	287	parallel

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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	164	167	first strand
Strand 2	Q	244	250	anti-parallel
Strand 3	Q	182	198	anti-parallel
Strand 4	Q	216	227	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	164	167	first strand
Strand 2	Q	244	250	anti-parallel
Strand 3	Q	182	198	anti-parallel
Strand 4	Q	234	238	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3GZT

Analysis of interatomic Contacts of Structural Units in PDB entry:
3GZT