Analysis of interatomic Contacts of Structural Units in PDB entry:
3H05


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H05 entry

There are 2 chains in PDB entry 3H05 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 166
B
 MET 1LYS 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3H05. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 23Right-handed alpha
Helix 2
2
A
47 63Right-handed alpha
Helix 3
3
A
71 77Right-handed alpha
Helix 4
4
A
84 96Right-handed alpha
Helix 5
5
A
106 112Right-handed alpha
Helix 6
6
A
113 116Right-handed 310
Helix 7
7
A
118 126Right-handed alpha
Helix 8
8
A
138 149Right-handed alpha
Helix 9
9
A
157 166Right-handed alpha
Helix 10
10
B
15 23Right-handed alpha
Helix 11
11
B
47 63Right-handed alpha
Helix 12
12
B
71 77Right-handed alpha
Helix 13
13
B
84 96Right-handed alpha
Helix 14
14
B
106 112Right-handed alpha
Helix 15
15
B
113 116Right-handed 310
Helix 16
16
B
118 126Right-handed alpha
Helix 17
17
B
139 149Right-handed alpha
Helix 18
18
B
157 167Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3H05.

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 69first strand
Strand 2
A
30 35parallel
Strand 3
A
3 9parallel
Strand 4
A
100 105parallel
Strand 5
A
127 130parallel
Strand 6
B
127 130anti-parallel
Strand 7
B
100 105parallel
Strand 8
B
3 9parallel
Strand 9
B
30 35parallel
Strand 10
B
67 69parallel
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