Analysis of interatomic Contacts of Structural Units in PDB entry:
3H09


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H09 entry

There are 2 chains in PDB entry 3H09 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 26PRO 989
B
 ALA 26PRO 989
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3H09. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
33 43Right-handed alpha
Helix 2
2
A
76 80Right-handed 310
Helix 3
3
A
129 132Right-handed 310
Helix 4
4
A
153 163Right-handed alpha
Helix 5
5
A
190 194Right-handed 310
Helix 6
6
A
272 276Right-handed 310
Helix 7
7
A
312 317Right-handed alpha
Helix 8
8
A
326 337Right-handed alpha
Helix 9
9
A
378 385Right-handed alpha
Helix 10
10
A
515 517Right-handed 310
Helix 11
11
A
570 574Right-handed 310
Helix 12
12
A
638 654Right-handed alpha
Helix 13
13
A
727 735Right-handed 310
Helix 14
14
A
809 814Right-handed alpha
Helix 15
15
A
912 915Right-handed 310
Helix 16
16
B
33 43Right-handed alpha
Helix 17
17
B
76 80Right-handed 310
Helix 18
18
B
103 105Right-handed 310
Helix 19
19
B
129 132Right-handed 310
Helix 20
20
B
153 163Right-handed alpha
Helix 21
21
B
190 194Right-handed 310
Helix 22
22
B
272 276Right-handed 310
Helix 23
23
B
312 317Right-handed alpha
Helix 24
24
B
326 337Right-handed alpha
Helix 25
25
B
378 385Right-handed alpha
Helix 26
26
B
515 517Right-handed 310
Helix 27
27
B
570 574Right-handed 310
Helix 28
28
B
638 654Right-handed alpha
Helix 29
29
B
727 735Right-handed 310
Helix 30
30
B
809 814Right-handed alpha
Helix 31
31
B
912 915Right-handed 310
Helix 32
32
B
969 973Right-handed 310
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There are no sheets in PDB entry 3H09
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il