Analysis of interatomic Contacts of Structural Units in PDB entry:
3H0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H0A entry

There are 4 chains in PDB entry 3H0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 228LEU 455
D
 PRO 206TYR 477
B
 THR 629THR 639
E
 THR 629THR 640
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 3H0A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
233 240Right-handed alpha
Helix 2
2
A
263 277Right-handed alpha
Helix 3
3
A
277 283Right-handed alpha
Helix 4
4
A
294 304Right-handed alpha
Helix 5
5
A
304 316Right-handed alpha
Helix 6
6
A
333 340Right-handed alpha
Helix 7
7
A
343 353Right-handed alpha
Helix 8
8
A
353 361Right-handed alpha
Helix 9
9
A
363 374Right-handed alpha
Helix 10
10
A
385 389Right-handed 310
Helix 11
11
A
390 408Right-handed alpha
Helix 12
12
A
413 439Right-handed alpha
Helix 13
13
D
206 226Right-handed alpha
Helix 14
14
D
229 238Right-handed alpha
Helix 15
15
D
251 260Right-handed alpha
Helix 16
16
D
276 302Right-handed alpha
Helix 17
17
D
305 309Right-handed 310
Helix 18
18
D
310 332Right-handed alpha
Helix 19
19
D
350 355Right-handed alpha
Helix 20
20
D
359 363Right-handed 310
Helix 21
21
D
364 375Right-handed alpha
Helix 22
22
D
376 378Right-handed 310
Helix 23
23
D
380 393Right-handed alpha
Helix 24
24
D
402 425Right-handed alpha
Helix 25
25
D
430 460Right-handed alpha
Helix 26
26
D
466 474Right-handed alpha
Helix 27
27
E
630 639Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3H0A.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
247 249first strand
Strand 2
D
346 349parallel
Strand 3
D
338 341anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il