Analysis of interatomic Contacts of Structural Units in PDB entry:
3H0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H0P entry

There are 2 chains in PDB entry 3H0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLN 309
B
 MSE 1GLN 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3H0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 26Right-handed alpha
Helix 2
2
A
27 41Right-handed alpha
Helix 3
3
A
43 51Right-handed alpha
Helix 4
4
A
52 57Right-handed alpha
Helix 5
5
A
58 80Right-handed alpha
Helix 6
6
A
92 102Right-handed alpha
Helix 7
7
A
106 124Right-handed alpha
Helix 8
8
A
139 152Right-handed alpha
Helix 9
9
A
173 186Right-handed alpha
Helix 10
10
A
202 204Right-handed 310
Helix 11
11
A
205 218Right-handed alpha
Helix 12
12
A
239 251Right-handed alpha
Helix 13
13
A
256 267Right-handed alpha
Helix 14
14
A
279 289Right-handed alpha
Helix 15
15
A
299 308Right-handed alpha
Helix 16
16
B
19 26Right-handed alpha
Helix 17
17
B
27 41Right-handed alpha
Helix 18
18
B
43 51Right-handed alpha
Helix 19
19
B
52 57Right-handed alpha
Helix 20
20
B
58 80Right-handed alpha
Helix 21
21
B
92 102Right-handed alpha
Helix 22
22
B
106 124Right-handed alpha
Helix 23
23
B
139 152Right-handed alpha
Helix 24
24
B
173 186Right-handed alpha
Helix 25
25
B
202 204Right-handed 310
Helix 26
26
B
205 217Right-handed alpha
Helix 27
27
B
239 251Right-handed alpha
Helix 28
28
B
256 267Right-handed alpha
Helix 29
29
B
279 289Right-handed alpha
Helix 30
30
B
299 308Right-handed alpha
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There are 6 sheets in PDB entry 3H0P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
4 8parallel
Strand 3
A
271 274parallel
Strand 4
A
293 296parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 163first strand
Strand 2
A
166 172anti-parallel
Strand 3
A
130 136anti-parallel
Strand 4
A
190 193anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
235 236anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 90first strand
Strand 2
B
4 8parallel
Strand 3
B
271 274parallel
Strand 4
B
293 296parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 163first strand
Strand 2
B
166 172anti-parallel
Strand 3
B
130 136anti-parallel
Strand 4
B
190 193anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 230first strand
Strand 2
B
235 236anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il