Analysis of interatomic Contacts of Structural Units in PDB entry:
3H15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H15 entry

There are 2 chains in PDB entry 3H15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 235VAL 407
B
 C 9 C 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 3H15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
252 261Right-handed alpha
Helix 2
2
A
267 269Right-handed 310
Helix 3
3
A
270 277Right-handed alpha
Helix 4
4
A
326 334Right-handed alpha
Helix 5
5
A
365 367Right-handed 310
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There are 3 sheets in PDB entry 3H15. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
369 375anti-parallel
Strand 3
A
340 345anti-parallel
Strand 4
A
285 295anti-parallel
Strand 5
A
264 265parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
369 375anti-parallel
Strand 3
A
340 345anti-parallel
Strand 4
A
285 295anti-parallel
Strand 5
A
307 312anti-parallel
Strand 6
A
321 325anti-parallel
Strand 7
A
360 362parallel
Strand 8
A
348 349anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
394 396anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il