Analysis of interatomic Contacts of Structural Units in PDB entry:
3H1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H1T entry

There is 1 chain in PDB entry 3H1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21VAL 590
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 3H1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 33Right-handed alpha
Helix 2
2
A
33 41Right-handed alpha
Helix 3
3
A
99 102Right-handed 310
Helix 4
4
A
103 115Right-handed alpha
Helix 5
5
A
145 158Right-handed alpha
Helix 6
6
A
160 162Right-handed 310
Helix 7
7
A
163 168Right-handed alpha
Helix 8
8
A
180 196Right-handed alpha
Helix 9
9
A
210 225Right-handed alpha
Helix 10
10
A
283 285Right-handed 310
Helix 11
11
A
293 298Right-handed 310
Helix 12
12
A
322 329Right-handed alpha
Helix 13
13
A
346 353Right-handed alpha
Helix 14
14
A
361 368Right-handed alpha
Helix 15
15
A
411 421Right-handed alpha
Helix 16
16
A
421 437Right-handed alpha
Helix 17
17
A
448 463Right-handed alpha
Helix 18
18
A
463 468Right-handed alpha
Helix 19
19
A
481 494Right-handed alpha
Helix 20
20
A
529 538Right-handed alpha
Helix 21
21
A
544 548Right-handed 310
Helix 22
22
A
560 565Right-handed alpha
Helix 23
23
A
567 572Right-handed alpha
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There are 4 sheets in PDB entry 3H1T. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 55first strand
Strand 2
A
75 83anti-parallel
Strand 3
A
86 93anti-parallel
Strand 4
A
118 122parallel
Strand 5
A
127 131anti-parallel
Strand 6
A
137 140anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
67 70anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 265first strand
Strand 2
A
277 281parallel
Strand 3
A
238 242parallel
Strand 4
A
305 308parallel
Strand 5
A
333 338parallel
Strand 6
A
200 205parallel
Strand 7
A
358 360parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 476first strand
Strand 2
A
502 505parallel
Strand 3
A
441 446parallel
Strand 4
A
518 524parallel
Strand 5
A
552 556parallel
Strand 6
A
374 381parallel
Strand 7
A
576 582parallel
Strand 8
A
588 589anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il