Analysis of interatomic Contacts of Structural Units in PDB entry:
3H2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H2V entry

There are 8 chains in PDB entry 3H2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 884LYS 1061
B
 GLU 884PRO 1063
C
 GLU 884PRO 1063
D
 GLU 884PRO 1063
E
 HIS 57THR 130
F
 MET 58THR 130
G
 HIS 57THR 130
H
 MET 58THR 130
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3H2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
895 910Right-handed alpha
Helix 2
2
A
917 937Right-handed alpha
Helix 3
3
A
942 972Right-handed alpha
Helix 4
4
A
974 1006Right-handed alpha
Helix 5
5
A
1012 1044Right-handed alpha
Helix 6
6
B
895 910Right-handed alpha
Helix 7
7
B
917 937Right-handed alpha
Helix 8
8
B
942 972Right-handed alpha
Helix 9
9
B
974 1006Right-handed alpha
Helix 10
10
B
1012 1044Right-handed alpha
Helix 11
11
C
895 911Right-handed alpha
Helix 12
12
C
917 937Right-handed alpha
Helix 13
13
C
942 972Right-handed alpha
Helix 14
14
C
974 985Right-handed alpha
Helix 15
15
C
986 1006Right-handed alpha
Helix 16
16
C
1012 1044Right-handed alpha
Helix 17
17
D
895 910Right-handed alpha
Helix 18
18
D
917 937Right-handed alpha
Helix 19
19
D
942 972Right-handed alpha
Helix 20
20
D
974 1006Right-handed alpha
Helix 21
21
D
1012 1044Right-handed alpha
Helix 22
22
E
71 79Right-handed alpha
Helix 23
23
E
102 114Right-handed alpha
Helix 24
24
F
71 79Right-handed alpha
Helix 25
25
F
102 114Right-handed alpha
Helix 26
26
G
71 79Right-handed alpha
Helix 27
27
G
102 114Right-handed alpha
Helix 28
28
H
71 79Right-handed alpha
Helix 29
29
H
102 114Right-handed alpha
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There are 8 sheets in PDB entry 3H2V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 90first strand
Strand 2
E
95 99anti-parallel
Strand 3
E
60 64anti-parallel
Strand 4
E
124 127anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
117 118first strand
Strand 2
E
121 122anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
84 90first strand
Strand 2
F
95 100anti-parallel
Strand 3
F
60 64anti-parallel
Strand 4
F
124 127anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
117 118first strand
Strand 2
F
121 122anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
84 90first strand
Strand 2
G
95 100anti-parallel
Strand 3
G
60 64anti-parallel
Strand 4
G
124 127anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
117 118first strand
Strand 2
G
121 122anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
84 90first strand
Strand 2
H
95 100anti-parallel
Strand 3
H
60 64anti-parallel
Strand 4
H
124 127anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
117 118first strand
Strand 2
H
121 122anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il