Analysis of interatomic Contacts of Structural Units in PDB entry:
3H35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H35 entry

There are 3 chains in PDB entry 3H35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 31THR 174
B
 SER 36THR 174
C
 GLU 34THR 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3H35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 49Right-handed alpha
Helix 2
2
A
53 64Right-handed alpha
Helix 3
3
A
91 97Right-handed alpha
Helix 4
4
A
100 102Right-handed 310
Helix 5
5
A
103 114Right-handed alpha
Helix 6
6
A
123 125Right-handed 310
Helix 7
7
A
126 136Right-handed alpha
Helix 8
8
A
136 150Right-handed alpha
Helix 9
9
A
163 174Right-handed alpha
Helix 10
10
B
38 50Right-handed alpha
Helix 11
11
B
53 65Right-handed alpha
Helix 12
12
B
100 102Right-handed 310
Helix 13
13
B
103 114Right-handed alpha
Helix 14
14
B
123 125Right-handed 310
Helix 15
15
B
126 136Right-handed alpha
Helix 16
16
B
136 150Right-handed alpha
Helix 17
17
B
163 174Right-handed alpha
Helix 18
18
C
36 50Right-handed alpha
Helix 19
19
C
53 65Right-handed alpha
Helix 20
20
C
92 97Right-handed 310
Helix 21
21
C
100 102Right-handed 310
Helix 22
22
C
103 114Right-handed alpha
Helix 23
23
C
123 125Right-handed 310
Helix 24
24
C
126 136Right-handed alpha
Helix 25
25
C
136 150Right-handed alpha
Helix 26
26
C
163 174Right-handed alpha
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There are 3 sheets in PDB entry 3H35. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 89first strand
Strand 2
A
69 75anti-parallel
Strand 3
A
154 162anti-parallel
Strand 4
A
117 121anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 90first strand
Strand 2
B
69 75anti-parallel
Strand 3
B
154 162anti-parallel
Strand 4
B
117 121anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
85 89first strand
Strand 2
C
69 75anti-parallel
Strand 3
C
154 162anti-parallel
Strand 4
C
117 120anti-parallel
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