Analysis of interatomic Contacts of Structural Units in PDB entry:
3H37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H37 entry

There are 2 chains in PDB entry 3H37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LYS 429
B
 GLN 2ALA 431
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 51 helices in PDB entry 3H37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 15Right-handed alpha
Helix 2
2
A
16 33Right-handed alpha
Helix 3
3
A
41 50Right-handed alpha
Helix 4
4
A
63 73Right-handed alpha
Helix 5
5
A
121 127Right-handed alpha
Helix 6
6
A
131 135Right-handed 310
Helix 7
7
A
153 160Right-handed alpha
Helix 8
8
A
169 174Right-handed alpha
Helix 9
9
A
176 189Right-handed alpha
Helix 10
10
A
193 206Right-handed alpha
Helix 11
11
A
208 212Right-handed 310
Helix 12
12
A
213 227Right-handed alpha
Helix 13
13
A
229 240Right-handed alpha
Helix 14
14
A
253 275Right-handed alpha
Helix 15
15
A
278 288Right-handed alpha
Helix 16
16
A
292 303Right-handed alpha
Helix 17
17
A
308 328Right-handed alpha
Helix 18
18
A
332 337Right-handed alpha
Helix 19
19
A
338 341Right-handed 310
Helix 20
20
A
344 353Right-handed alpha
Helix 21
21
A
356 372Right-handed alpha
Helix 22
22
A
381 388Right-handed alpha
Helix 23
23
A
392 406Right-handed alpha
Helix 24
24
A
411 427Right-handed alpha
Helix 25
25
B
7 15Right-handed alpha
Helix 26
26
B
16 33Right-handed alpha
Helix 27
27
B
41 50Right-handed alpha
Helix 28
28
B
63 74Right-handed alpha
Helix 29
29
B
117 120Right-handed 310
Helix 30
30
B
121 128Right-handed alpha
Helix 31
31
B
131 135Right-handed 310
Helix 32
32
B
141 145Right-handed 310
Helix 33
33
B
153 160Right-handed alpha
Helix 34
34
B
169 174Right-handed alpha
Helix 35
35
B
175 188Right-handed alpha
Helix 36
36
B
193 207Right-handed alpha
Helix 37
37
B
208 212Right-handed 310
Helix 38
38
B
213 227Right-handed alpha
Helix 39
39
B
229 240Right-handed alpha
Helix 40
40
B
241 247Right-handed alpha
Helix 41
41
B
253 275Right-handed alpha
Helix 42
42
B
278 288Right-handed alpha
Helix 43
43
B
292 304Right-handed alpha
Helix 44
44
B
308 328Right-handed alpha
Helix 45
45
B
333 335Right-handed 310
Helix 46
46
B
336 341Right-handed alpha
Helix 47
47
B
344 353Right-handed alpha
Helix 48
48
B
356 371Right-handed alpha
Helix 49
49
B
392 405Right-handed alpha
Helix 50
50
B
413 419Right-handed alpha
Helix 51
51
B
420 423Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 3H37. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
147 149anti-parallel
Strand 3
A
137 139anti-parallel
Strand 4
A
37 40anti-parallel
Strand 5
A
56 60anti-parallel
Strand 6
A
97 102parallel
Strand 7
A
88 92anti-parallel
Strand 8
A
77 80anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
191 192parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
147 149anti-parallel
Strand 3
B
137 139anti-parallel
Strand 4
B
37 40anti-parallel
Strand 5
B
56 60anti-parallel
Strand 6
B
97 102parallel
Strand 7
B
87 92anti-parallel
Strand 8
B
77 82anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
191 192parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il