Analysis of interatomic Contacts of Structural Units in PDB entry:
3H3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H3E entry

There is 1 chain in PDB entry 3H3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ASP 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3H3E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 45Right-handed alpha
Helix 2
2
A
59 64Right-handed alpha
Helix 3
3
A
65 69Right-handed 310
Helix 4
4
A
79 82Right-handed 310
Helix 5
5
A
94 102Right-handed alpha
Helix 6
6
A
172 182Right-handed alpha
Helix 7
7
A
201 215Right-handed alpha
Helix 8
8
A
227 238Right-handed alpha
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There are 3 sheets in PDB entry 3H3E. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
73 77parallel
Strand 3
A
52 54parallel
Strand 4
A
28 30parallel
Strand 5
A
22 25anti-parallel
Strand 6
A
1 7anti-parallel
Strand 7
A
250 253anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
83 86anti-parallel
Strand 3
A
135 138anti-parallel
Strand 4
A
143 145anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
118 121anti-parallel
Strand 3
A
153 158anti-parallel
Strand 4
A
161 166anti-parallel
Strand 5
A
188 194parallel
Strand 6
A
219 223parallel
Strand 7
A
241 242parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il