Analysis of interatomic Contacts of Structural Units in PDB entry:
3H3F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3H3F entry

There are 8 chains in PDB entry 3H3F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	PHE 331
B	ALA 1	PHE 331
C	ALA 1	PHE 331
D	ALA 1	PHE 331
E	ALA 1	PHE 331
F	ALA 1	PHE 331
G	ALA 1	PHE 331
H	ALA 1	PHE 331

There are123 helices in PDB entry 3H3F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	2	7	Right-handed alpha
Helix 2	2	A	28	41	Right-handed alpha
Helix 3	3	A	53	66	Right-handed alpha
Helix 4	4	A	67	71	Right-handed 310
Helix 5	5	A	81	86	Right-handed 310
Helix 6	6	A	106	127	Right-handed alpha
Helix 7	7	A	138	151	Right-handed alpha
Helix 8	8	A	153	155	Right-handed 310
Helix 9	9	A	162	178	Right-handed alpha
Helix 10	10	A	180	182	Right-handed 310
Helix 11	11	A	210	214	Right-handed alpha
Helix 12	12	A	226	235	Right-handed alpha
Helix 13	13	A	235	245	Right-handed alpha
Helix 14	14	A	248	265	Right-handed alpha
Helix 15	15	A	308	327	Right-handed alpha
Helix 16	16	B	2	7	Right-handed alpha
Helix 17	17	B	28	41	Right-handed alpha
Helix 18	18	B	53	67	Right-handed alpha
Helix 19	19	B	68	71	Right-handed 310
Helix 20	20	B	81	86	Right-handed 310
Helix 21	21	B	105	107	Right-handed 310
Helix 22	22	B	108	127	Right-handed alpha
Helix 23	23	B	138	151	Right-handed alpha
Helix 24	24	B	153	155	Right-handed 310
Helix 25	25	B	162	178	Right-handed alpha
Helix 26	26	B	180	184	Right-handed 310
Helix 27	27	B	210	214	Right-handed alpha
Helix 28	28	B	226	235	Right-handed alpha
Helix 29	29	B	235	245	Right-handed alpha
Helix 30	30	B	248	264	Right-handed alpha
Helix 31	31	B	308	329	Right-handed alpha
Helix 32	32	C	2	7	Right-handed alpha
Helix 33	33	C	28	41	Right-handed alpha
Helix 34	34	C	53	67	Right-handed alpha
Helix 35	35	C	68	71	Right-handed 310
Helix 36	36	C	81	86	Right-handed 310
Helix 37	37	C	104	107	Right-handed 310
Helix 38	38	C	108	127	Right-handed alpha
Helix 39	39	C	138	151	Right-handed alpha
Helix 40	40	C	153	155	Right-handed 310
Helix 41	41	C	162	178	Right-handed alpha
Helix 42	42	C	180	182	Right-handed 310
Helix 43	43	C	210	214	Right-handed alpha
Helix 44	44	C	226	245	Right-handed alpha
Helix 45	45	C	248	265	Right-handed alpha
Helix 46	46	C	308	325	Right-handed alpha
Helix 47	47	D	2	7	Right-handed alpha
Helix 48	48	D	28	40	Right-handed alpha
Helix 49	49	D	53	66	Right-handed alpha
Helix 50	50	D	67	71	Right-handed 310
Helix 51	51	D	81	86	Right-handed 310
Helix 52	52	D	104	127	Right-handed alpha
Helix 53	53	D	138	151	Right-handed alpha
Helix 54	54	D	153	155	Right-handed 310
Helix 55	55	D	162	178	Right-handed alpha
Helix 56	56	D	180	182	Right-handed 310
Helix 57	57	D	200	202	Right-handed 310
Helix 58	58	D	210	214	Right-handed alpha
Helix 59	59	D	226	245	Right-handed alpha
Helix 60	60	D	248	265	Right-handed alpha
Helix 61	61	D	308	327	Right-handed alpha
Helix 62	62	E	2	7	Right-handed alpha
Helix 63	63	E	28	41	Right-handed alpha
Helix 64	64	E	53	67	Right-handed alpha
Helix 65	65	E	68	71	Right-handed 310
Helix 66	66	E	81	86	Right-handed 310
Helix 67	67	E	108	127	Right-handed alpha
Helix 68	68	E	138	151	Right-handed alpha
Helix 69	69	E	153	155	Right-handed 310
Helix 70	70	E	162	178	Right-handed alpha
Helix 71	71	E	192	196	Right-handed 310
Helix 72	72	E	200	202	Right-handed 310
Helix 73	73	E	210	214	Right-handed alpha
Helix 74	74	E	225	235	Right-handed alpha
Helix 75	75	E	235	245	Right-handed alpha
Helix 76	76	E	248	265	Right-handed alpha
Helix 77	77	E	310	328	Right-handed alpha
Helix 78	78	F	2	7	Right-handed alpha
Helix 79	79	F	28	41	Right-handed alpha
Helix 80	80	F	53	67	Right-handed alpha
Helix 81	81	F	68	71	Right-handed 310
Helix 82	82	F	81	86	Right-handed 310
Helix 83	83	F	104	107	Right-handed 310
Helix 84	84	F	108	127	Right-handed alpha
Helix 85	85	F	138	151	Right-handed alpha
Helix 86	86	F	153	155	Right-handed 310
Helix 87	87	F	162	178	Right-handed alpha
Helix 88	88	F	180	182	Right-handed 310
Helix 89	89	F	210	214	Right-handed alpha
Helix 90	90	F	226	245	Right-handed alpha
Helix 91	91	F	248	265	Right-handed alpha
Helix 92	92	F	310	328	Right-handed alpha
Helix 93	93	G	2	7	Right-handed alpha
Helix 94	94	G	28	41	Right-handed alpha
Helix 95	95	G	53	67	Right-handed alpha
Helix 96	96	G	68	71	Right-handed 310
Helix 97	97	G	81	86	Right-handed 310
Helix 98	98	G	104	107	Right-handed 310
Helix 99	99	G	108	127	Right-handed alpha
Helix 100	100	G	138	151	Right-handed alpha
Helix 101	101	G	153	155	Right-handed 310
Helix 102	102	G	162	178	Right-handed alpha
Helix 103	103	G	180	182	Right-handed 310
Helix 104	104	G	210	214	Right-handed alpha
Helix 105	105	G	225	235	Right-handed alpha
Helix 106	106	G	235	245	Right-handed alpha
Helix 107	107	G	248	265	Right-handed alpha
Helix 108	108	G	308	327	Right-handed alpha
Helix 109	109	H	2	7	Right-handed alpha
Helix 110	110	H	28	40	Right-handed alpha
Helix 111	111	H	53	66	Right-handed alpha
Helix 112	112	H	67	71	Right-handed 310
Helix 113	113	H	81	86	Right-handed 310
Helix 114	114	H	106	127	Right-handed alpha
Helix 115	115	H	138	151	Right-handed alpha
Helix 116	116	H	153	155	Right-handed 310
Helix 117	117	H	162	178	Right-handed alpha
Helix 118	118	H	180	184	Right-handed 310
Helix 119	119	H	200	202	Right-handed 310
Helix 120	120	H	210	214	Right-handed alpha
Helix 121	121	H	226	245	Right-handed alpha
Helix 122	122	H	248	265	Right-handed alpha
Helix 123	123	H	308	327	Right-handed alpha

There are 27 sheets in PDB entry 3H3F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	10	first strand
Strand 2	D	298	303	anti-parallel
Strand 3	D	287	295	anti-parallel
Strand 4	D	268	275	anti-parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	79	first strand
Strand 2	A	46	50	parallel
Strand 3	A	21	25	parallel
Strand 4	A	88	93	parallel
Strand 5	A	131	134	parallel
Strand 6	A	157	159	parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	184	189	first strand
Strand 2	A	197	205	anti-parallel
Strand 3	A	208	209	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	268	275	first strand
Strand 2	A	287	295	anti-parallel
Strand 3	A	298	303	anti-parallel
Strand 4	D	8	10	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	8	10	first strand
Strand 2	C	298	303	anti-parallel
Strand 3	C	287	295	anti-parallel
Strand 4	C	268	275	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	79	first strand
Strand 2	B	46	50	parallel
Strand 3	B	21	25	parallel
Strand 4	B	90	93	parallel
Strand 5	B	131	134	parallel
Strand 6	B	157	159	parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	189	first strand
Strand 2	B	197	205	anti-parallel
Strand 3	B	208	209	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	275	first strand
Strand 2	B	287	295	anti-parallel
Strand 3	B	298	303	anti-parallel
Strand 4	C	8	10	anti-parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	78	first strand
Strand 2	C	46	50	parallel
Strand 3	C	21	25	parallel
Strand 4	C	90	93	parallel
Strand 5	C	131	134	parallel
Strand 6	C	157	159	parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	184	190	first strand
Strand 2	C	196	205	anti-parallel
Strand 3	C	208	209	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	79	first strand
Strand 2	D	46	50	parallel
Strand 3	D	21	25	parallel
Strand 4	D	90	93	parallel
Strand 5	D	131	134	parallel
Strand 6	D	157	159	parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	184	185	first strand
Strand 2	D	204	205	anti-parallel
Strand 3	D	208	209	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	189	first strand
Strand 2	D	197	198	anti-parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	10	first strand
Strand 2	H	298	303	anti-parallel
Strand 3	H	287	295	anti-parallel
Strand 4	H	268	275	anti-parallel

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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	79	first strand
Strand 2	E	46	50	parallel
Strand 3	E	21	25	parallel
Strand 4	E	90	93	parallel
Strand 5	E	131	134	parallel
Strand 6	E	157	159	parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	184	185	first strand
Strand 2	E	204	205	anti-parallel
Strand 3	E	208	209	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	188	189	first strand
Strand 2	E	197	198	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	268	275	first strand
Strand 2	E	287	295	anti-parallel
Strand 3	E	298	303	anti-parallel
Strand 4	H	8	10	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	10	first strand
Strand 2	G	298	303	anti-parallel
Strand 3	G	287	295	anti-parallel
Strand 4	G	268	275	anti-parallel

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There are 6 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	75	78	first strand
Strand 2	F	46	50	parallel
Strand 3	F	21	25	parallel
Strand 4	F	90	93	parallel
Strand 5	F	131	134	parallel
Strand 6	F	157	159	parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	184	189	first strand
Strand 2	F	197	205	anti-parallel
Strand 3	F	208	209	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	268	275	first strand
Strand 2	F	287	295	anti-parallel
Strand 3	F	298	303	anti-parallel
Strand 4	G	8	10	anti-parallel

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There are 6 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	78	first strand
Strand 2	G	46	50	parallel
Strand 3	G	21	25	parallel
Strand 4	G	90	93	parallel
Strand 5	G	131	134	parallel
Strand 6	G	157	159	parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	184	189	first strand
Strand 2	G	197	205	anti-parallel
Strand 3	G	208	209	anti-parallel

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There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	78	first strand
Strand 2	H	46	50	parallel
Strand 3	H	21	25	parallel
Strand 4	H	90	93	parallel
Strand 5	H	131	134	parallel
Strand 6	H	157	159	parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	188	189	first strand
Strand 2	H	197	198	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	204	205	first strand
Strand 2	H	208	209	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3H3F

Analysis of interatomic Contacts of Structural Units in PDB entry:
3H3F