Analysis of interatomic Contacts of Structural Units in PDB entry:
3H4T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H4T entry

There is 1 chain in PDB entry 3H4T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 540
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3H4T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 27Right-handed alpha
Helix 2
2
A
36 38Right-handed 310
Helix 3
3
A
39 46Right-handed alpha
Helix 4
4
A
58 62Right-handed 310
Helix 5
5
A
71 73Right-handed 310
Helix 6
6
A
74 91Right-handed alpha
Helix 7
7
A
101 116Right-handed alpha
Helix 8
8
A
125 133Right-handed 310
Helix 9
9
A
134 160Right-handed alpha
Helix 10
10
A
167 174Right-handed alpha
Helix 11
11
A
210 219Right-handed alpha
Helix 12
12
A
236 248Right-handed alpha
Helix 13
13
A
277 282Right-handed alpha
Helix 14
14
A
283 285Right-handed 310
Helix 15
15
A
293 304Right-handed alpha
Helix 16
16
A
315 327Right-handed alpha
Helix 17
17
A
338 350Right-handed alpha
Helix 18
18
A
351 363Right-handed alpha
Helix 19
19
A
368 383Right-handed alpha
Helix 20
20
A
533 540Right-handed alpha
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There are 2 sheets in PDB entry 3H4T. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
31 35parallel
Strand 3
A
3 8parallel
Strand 4
A
95 100parallel
Strand 5
A
119 123parallel
Strand 6
A
178 179parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
252 255parallel
Strand 3
A
224 226parallel
Strand 4
A
287 290parallel
Strand 5
A
307 309parallel
Strand 6
A
329 331parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il