Analysis of interatomic Contacts of Structural Units in PDB entry:
3H5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H5A entry

There are 4 chains in PDB entry 3H5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 358
B
 MET 1HIS 358
C
 MET 1HIS 358
D
 MET 1HIS 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3H5A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 45Right-handed alpha
Helix 2
2
A
50 58Right-handed alpha
Helix 3
3
A
61 75Right-handed alpha
Helix 4
4
A
82 85Right-handed 310
Helix 5
5
A
92 102Right-handed alpha
Helix 6
6
A
105 115Right-handed alpha
Helix 7
7
A
124 137Right-handed alpha
Helix 8
8
A
151 157Right-handed 310
Helix 9
9
A
162 166Right-handed 310
Helix 10
10
A
169 182Right-handed alpha
Helix 11
11
A
196 203Right-handed 310
Helix 12
12
A
218 230Right-handed alpha
Helix 13
13
A
272 285Right-handed alpha
Helix 14
14
A
291 312Right-handed alpha
Helix 15
15
B
31 45Right-handed alpha
Helix 16
16
B
50 58Right-handed alpha
Helix 17
17
B
61 75Right-handed alpha
Helix 18
18
B
82 84Right-handed 310
Helix 19
19
B
92 102Right-handed alpha
Helix 20
20
B
105 115Right-handed alpha
Helix 21
21
B
125 138Right-handed alpha
Helix 22
22
B
151 157Right-handed 310
Helix 23
23
B
162 166Right-handed 310
Helix 24
24
B
169 182Right-handed alpha
Helix 25
25
B
196 203Right-handed 310
Helix 26
26
B
218 231Right-handed alpha
Helix 27
27
B
272 285Right-handed alpha
Helix 28
28
B
291 312Right-handed alpha
Helix 29
29
C
22 26Right-handed 310
Helix 30
30
C
31 45Right-handed alpha
Helix 31
31
C
51 56Right-handed alpha
Helix 32
32
C
61 75Right-handed alpha
Helix 33
33
C
82 85Right-handed 310
Helix 34
34
C
92 94Right-handed 310
Helix 35
35
C
95 102Right-handed alpha
Helix 36
36
C
105 115Right-handed alpha
Helix 37
37
C
124 138Right-handed alpha
Helix 38
38
C
152 157Right-handed 310
Helix 39
39
C
162 166Right-handed 310
Helix 40
40
C
169 182Right-handed alpha
Helix 41
41
C
196 203Right-handed 310
Helix 42
42
C
218 230Right-handed alpha
Helix 43
43
C
272 285Right-handed alpha
Helix 44
44
C
291 312Right-handed alpha
Helix 45
45
D
31 45Right-handed alpha
Helix 46
46
D
50 58Right-handed alpha
Helix 47
47
D
61 75Right-handed alpha
Helix 48
48
D
82 85Right-handed 310
Helix 49
49
D
92 102Right-handed alpha
Helix 50
50
D
105 115Right-handed alpha
Helix 51
51
D
125 138Right-handed alpha
Helix 52
52
D
151 157Right-handed 310
Helix 53
53
D
162 166Right-handed 310
Helix 54
54
D
169 182Right-handed alpha
Helix 55
55
D
196 203Right-handed 310
Helix 56
56
D
218 231Right-handed alpha
Helix 57
57
D
272 285Right-handed alpha
Helix 58
58
D
291 312Right-handed alpha
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There are 13 sheets in PDB entry 3H5A. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
78 80anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
18 20anti-parallel
Strand 3
A
27 29anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 190first strand
Strand 2
A
141 145parallel
Strand 3
A
117 121parallel
Strand 4
A
208 211parallel
Strand 5
A
234 240parallel
Strand 6
A
243 250anti-parallel
Strand 7
A
321 325anti-parallel
Strand 8
A
332 336anti-parallel
Strand 9
D
350 352anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
78 80anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 14first strand
Strand 2
B
17 20anti-parallel
Strand 3
B
27 29anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 190first strand
Strand 2
B
141 145parallel
Strand 3
B
117 121parallel
Strand 4
B
208 211parallel
Strand 5
B
234 240parallel
Strand 6
B
243 250anti-parallel
Strand 7
B
321 325anti-parallel
Strand 8
B
332 336anti-parallel
Strand 9
D
354 356parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 50first strand
Strand 2
C
2 5anti-parallel
Strand 3
C
78 80anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 14first strand
Strand 2
C
17 20anti-parallel
Strand 3
C
27 29anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
186 190first strand
Strand 2
C
141 145parallel
Strand 3
C
117 121parallel
Strand 4
C
208 211parallel
Strand 5
C
234 240parallel
Strand 6
C
243 250anti-parallel
Strand 7
C
321 326anti-parallel
Strand 8
C
332 336anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 5first strand
Strand 2
D
78 80anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
11 14first strand
Strand 2
D
17 20anti-parallel
Strand 3
D
27 29anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
186 190first strand
Strand 2
D
141 145parallel
Strand 3
D
118 121parallel
Strand 4
D
208 211parallel
Strand 5
D
234 236parallel
Strand 6
D
249 250anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
238 240first strand
Strand 2
D
243 246anti-parallel
Strand 3
D
321 325anti-parallel
Strand 4
D
332 336anti-parallel
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