Analysis of interatomic Contacts of Structural Units in PDB entry:
3H6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H6H entry

There are 2 chains in PDB entry 3H6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLU 384
B
 THR 1GLU 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3H6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 36Right-handed alpha
Helix 2
2
A
56 71Right-handed alpha
Helix 3
3
A
80 94Right-handed alpha
Helix 4
4
A
124 136Right-handed alpha
Helix 5
5
A
149 154Right-handed alpha
Helix 6
6
A
154 159Right-handed alpha
Helix 7
7
A
160 163Right-handed 310
Helix 8
8
A
176 179Right-handed 310
Helix 9
9
A
180 190Right-handed alpha
Helix 10
10
A
200 214Right-handed alpha
Helix 11
11
A
229 233Right-handed 310
Helix 12
12
A
255 267Right-handed alpha
Helix 13
13
A
286 304Right-handed alpha
Helix 14
14
A
324 334Right-handed alpha
Helix 15
15
B
20 36Right-handed alpha
Helix 16
16
B
56 71Right-handed alpha
Helix 17
17
B
80 94Right-handed alpha
Helix 18
18
B
124 136Right-handed alpha
Helix 19
19
B
148 154Right-handed alpha
Helix 20
20
B
154 159Right-handed alpha
Helix 21
21
B
160 163Right-handed 310
Helix 22
22
B
176 179Right-handed 310
Helix 23
23
B
180 190Right-handed alpha
Helix 24
24
B
200 215Right-handed alpha
Helix 25
25
B
229 233Right-handed 310
Helix 26
26
B
255 267Right-handed alpha
Helix 27
27
B
286 304Right-handed alpha
Helix 28
28
B
324 334Right-handed alpha
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There are 8 sheets in PDB entry 3H6H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 52first strand
Strand 2
A
3 12parallel
Strand 3
A
75 76parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
116 117parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 172first strand
Strand 2
A
140 145parallel
Strand 3
A
194 198parallel
Strand 4
A
222 225parallel
Strand 5
A
244 249parallel
Strand 6
A
358 364anti-parallel
Strand 7
A
367 375anti-parallel
Strand 8
A
379 382anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
342 344anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 52first strand
Strand 2
B
3 12parallel
Strand 3
B
75 76parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 100first strand
Strand 2
B
116 117parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 172first strand
Strand 2
B
140 145parallel
Strand 3
B
194 198parallel
Strand 4
B
222 225parallel
Strand 5
B
244 249parallel
Strand 6
B
358 364anti-parallel
Strand 7
B
367 375anti-parallel
Strand 8
B
379 382anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
337 339first strand
Strand 2
B
342 344anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il