Analysis of interatomic Contacts of Structural Units in PDB entry:
3H6Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3H6Z entry

There are 6 chains in PDB entry 3H6Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 531	ARG 977
L	HIS 18	ARG 19
L	VAL 21	ARG 23
B	GLY 531	ARG 977
M	HIS 18	ARG 19
M	VAL 21	ARG 23

There are 34 helices in PDB entry 3H6Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	538	543	Right-handed alpha
Helix 2	2	A	551	555	Right-handed 310
Helix 3	3	A	560	565	Right-handed alpha
Helix 4	4	A	617	621	Right-handed 310
Helix 5	5	A	635	641	Right-handed alpha
Helix 6	6	A	647	654	Right-handed 310
Helix 7	7	A	657	666	Right-handed alpha
Helix 8	8	A	674	683	Right-handed alpha
Helix 9	9	A	741	747	Right-handed alpha
Helix 10	10	A	753	762	Right-handed alpha
Helix 11	11	A	776	780	Right-handed 310
Helix 12	12	A	786	791	Right-handed alpha
Helix 13	13	A	859	864	Right-handed alpha
Helix 14	14	A	880	889	Right-handed alpha
Helix 15	15	A	894	898	Right-handed 310
Helix 16	16	A	945	949	Right-handed 310
Helix 17	17	A	963	969	Right-handed alpha
Helix 18	18	B	538	543	Right-handed alpha
Helix 19	19	B	551	555	Right-handed 310
Helix 20	20	B	560	565	Right-handed alpha
Helix 21	21	B	617	621	Right-handed 310
Helix 22	22	B	635	641	Right-handed alpha
Helix 23	23	B	647	654	Right-handed 310
Helix 24	24	B	657	666	Right-handed alpha
Helix 25	25	B	674	683	Right-handed alpha
Helix 26	26	B	741	747	Right-handed alpha
Helix 27	27	B	753	762	Right-handed alpha
Helix 28	28	B	776	780	Right-handed 310
Helix 29	29	B	786	791	Right-handed alpha
Helix 30	30	B	859	864	Right-handed alpha
Helix 31	31	B	880	889	Right-handed alpha
Helix 32	32	B	894	898	Right-handed 310
Helix 33	33	B	945	949	Right-handed 310
Helix 34	34	B	963	969	Right-handed alpha

There are 13 sheets in PDB entry 3H6Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	572	575	first strand
Strand 2	A	596	604	anti-parallel
Strand 3	A	607	612	anti-parallel
Strand 4	A	622	625	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	727	731	first strand
Strand 2	A	716	721	anti-parallel
Strand 3	A	703	713	anti-parallel
Strand 4	A	692	696	anti-parallel
Strand 5	A	737	738	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	727	731	first strand
Strand 2	A	716	721	anti-parallel
Strand 3	A	703	713	anti-parallel
Strand 4	A	749	751	parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	846	849	first strand
Strand 2	A	828	833	anti-parallel
Strand 3	A	811	823	anti-parallel
Strand 4	A	803	808	anti-parallel
Strand 5	A	855	856	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	950	953	first strand
Strand 2	A	936	940	anti-parallel
Strand 3	A	924	933	anti-parallel
Strand 4	A	912	916	anti-parallel
Strand 5	A	959	960	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	950	953	first strand
Strand 2	A	936	940	anti-parallel
Strand 3	A	924	933	anti-parallel
Strand 4	A	972	973	parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	622	625	first strand
Strand 2	B	607	612	anti-parallel
Strand 3	B	596	604	anti-parallel
Strand 4	B	572	575	anti-parallel
Strand 5	B	632	633	anti-parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	727	731	first strand
Strand 2	B	716	721	anti-parallel
Strand 3	B	700	713	anti-parallel
Strand 4	B	692	697	anti-parallel
Strand 5	B	737	738	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	727	731	first strand
Strand 2	B	716	721	anti-parallel
Strand 3	B	700	713	anti-parallel
Strand 4	B	749	751	parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	846	849	first strand
Strand 2	B	828	833	anti-parallel
Strand 3	B	811	823	anti-parallel
Strand 4	B	802	808	anti-parallel
Strand 5	B	855	856	anti-parallel

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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	846	849	first strand
Strand 2	B	828	833	anti-parallel
Strand 3	B	811	823	anti-parallel
Strand 4	B	802	808	anti-parallel
Strand 5	B	891	892	parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	950	953	first strand
Strand 2	B	936	941	anti-parallel
Strand 3	B	924	933	anti-parallel
Strand 4	B	912	916	anti-parallel
Strand 5	B	959	960	anti-parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	950	953	first strand
Strand 2	B	936	941	anti-parallel
Strand 3	B	924	933	anti-parallel
Strand 4	B	972	973	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3H6Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
3H6Z