Analysis of interatomic Contacts of Structural Units in PDB entry:
3H71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H71 entry

There are 2 chains in PDB entry 3H71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 320LEU 793
B
 LEU 317LEU 793
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3H71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
407 411Right-handed 310
Helix 2
2
A
440 445Right-handed 310
Helix 3
3
A
499 503Right-handed 310
Helix 4
4
A
554 559Right-handed alpha
Helix 5
5
A
596 601Right-handed alpha
Helix 6
6
A
640 644Right-handed 310
Helix 7
7
A
786 791Right-handed alpha
Helix 8
8
B
407 411Right-handed 310
Helix 9
9
B
440 444Right-handed 310
Helix 10
10
B
499 503Right-handed 310
Helix 11
11
B
554 559Right-handed alpha
Helix 12
12
B
596 601Right-handed alpha
Helix 13
13
B
640 643Right-handed 310
Helix 14
14
B
786 791Right-handed alpha
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There are 20 sheets in PDB entry 3H71. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 330first strand
Strand 2
A
778 785anti-parallel
Strand 3
A
762 769anti-parallel
Strand 4
A
753 759anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 353first strand
Strand 2
A
359 366anti-parallel
Strand 3
A
376 383anti-parallel
Strand 4
A
394 397anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 553first strand
Strand 2
A
535 541anti-parallel
Strand 3
A
429 436anti-parallel
Strand 4
A
414 422anti-parallel
Strand 5
A
571 572parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 456first strand
Strand 2
A
459 466anti-parallel
Strand 3
A
473 475anti-parallel
Strand 4
A
480 482anti-parallel
Strand 5
A
488 493anti-parallel
Strand 6
A
507 510anti-parallel
Strand 7
A
513 517anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
453 456first strand
Strand 2
A
459 466anti-parallel
Strand 3
A
528 529anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 568first strand
Strand 2
A
585 591anti-parallel
Strand 3
A
574 575anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 568first strand
Strand 2
A
585 591anti-parallel
Strand 3
A
603 609anti-parallel
Strand 4
A
617 618anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
626 628first strand
Strand 2
A
631 633anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
648 652first strand
Strand 2
A
658 662anti-parallel
Strand 3
A
668 674anti-parallel
Strand 4
A
686 692anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
699 705first strand
Strand 2
A
708 716anti-parallel
Strand 3
A
722 731anti-parallel
Strand 4
A
737 749anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 330first strand
Strand 2
B
778 785anti-parallel
Strand 3
B
762 769anti-parallel
Strand 4
B
753 759anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 353first strand
Strand 2
B
359 366anti-parallel
Strand 3
B
376 383anti-parallel
Strand 4
B
394 397anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
552 553first strand
Strand 2
B
535 541anti-parallel
Strand 3
B
429 436anti-parallel
Strand 4
B
414 422anti-parallel
Strand 5
B
571 572parallel
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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
453 456first strand
Strand 2
B
459 466anti-parallel
Strand 3
B
473 475anti-parallel
Strand 4
B
480 482anti-parallel
Strand 5
B
488 493anti-parallel
Strand 6
B
507 510anti-parallel
Strand 7
B
513 517anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
453 456first strand
Strand 2
B
459 466anti-parallel
Strand 3
B
528 529anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 568first strand
Strand 2
B
585 591anti-parallel
Strand 3
B
574 575anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
566 568first strand
Strand 2
B
585 591anti-parallel
Strand 3
B
603 609anti-parallel
Strand 4
B
617 618anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
626 628first strand
Strand 2
B
631 633anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
645 652first strand
Strand 2
B
658 664anti-parallel
Strand 3
B
668 674anti-parallel
Strand 4
B
686 692anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
699 705first strand
Strand 2
B
708 716anti-parallel
Strand 3
B
722 731anti-parallel
Strand 4
B
737 749anti-parallel
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