Analysis of interatomic Contacts of Structural Units in PDB entry:
3H7F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H7F entry

There are 4 chains in PDB entry 3H7F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1HIS 226
A
 THR 228GLY 425
B
 GLY -1HIS 226
B
 THR 228ARG 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3H7F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 3Right-handed 310
Helix 2
2
A
4 9Right-handed alpha
Helix 3
3
A
9 26Right-handed alpha
Helix 4
4
A
37 45Right-handed alpha
Helix 5
5
A
46 51Right-handed 310
Helix 6
6
A
65 84Right-handed alpha
Helix 7
7
A
94 107Right-handed alpha
Helix 8
8
A
118 121Right-handed 310
Helix 9
9
A
123 127Right-handed 310
Helix 10
10
A
131 136Right-handed alpha
Helix 11
11
A
152 164Right-handed alpha
Helix 12
12
A
180 192Right-handed alpha
Helix 13
13
A
202 208Right-handed alpha
Helix 14
14
A
226 230Right-handed 310
Helix 15
15
A
243 252Right-handed alpha
Helix 16
16
A
260 274Right-handed alpha
Helix 17
17
A
276 298Right-handed alpha
Helix 18
18
A
299 305Right-handed alpha
Helix 19
19
A
311 313Right-handed 310
Helix 20
20
A
329 340Right-handed alpha
Helix 21
21
A
366 373Right-handed alpha
Helix 22
22
A
375 392Right-handed alpha
Helix 23
23
A
393 396Right-handed 310
Helix 24
24
A
397 412Right-handed alpha
Helix 25
25
A
417 421Right-handed 310
Helix 26
26
B
-1 3Right-handed 310
Helix 27
27
B
4 9Right-handed alpha
Helix 28
28
B
9 26Right-handed alpha
Helix 29
29
B
37 45Right-handed alpha
Helix 30
30
B
46 51Right-handed 310
Helix 31
31
B
65 84Right-handed alpha
Helix 32
32
B
94 107Right-handed alpha
Helix 33
33
B
118 121Right-handed 310
Helix 34
34
B
123 127Right-handed 310
Helix 35
35
B
131 136Right-handed alpha
Helix 36
36
B
152 164Right-handed alpha
Helix 37
37
B
180 192Right-handed alpha
Helix 38
38
B
202 208Right-handed alpha
Helix 39
39
B
226 230Right-handed 310
Helix 40
40
B
243 252Right-handed alpha
Helix 41
41
B
260 275Right-handed alpha
Helix 42
42
B
276 298Right-handed alpha
Helix 43
43
B
299 305Right-handed alpha
Helix 44
44
B
311 313Right-handed 310
Helix 45
45
B
329 340Right-handed alpha
Helix 46
46
B
366 373Right-handed alpha
Helix 47
47
B
375 392Right-handed alpha
Helix 48
48
B
393 396Right-handed 310
Helix 49
49
B
397 412Right-handed alpha
Helix 50
50
B
417 421Right-handed 310
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There are 8 sheets in PDB entry 3H7F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
342 343parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
59 60anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
235 239anti-parallel
Strand 3
A
220 224anti-parallel
Strand 4
A
194 198parallel
Strand 5
A
167 171parallel
Strand 6
A
112 116parallel
Strand 7
A
138 142parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 309first strand
Strand 2
A
318 322anti-parallel
Strand 3
A
361 365anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
342 343parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 56first strand
Strand 2
B
59 60anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 89first strand
Strand 2
B
235 239anti-parallel
Strand 3
B
220 224anti-parallel
Strand 4
B
194 198parallel
Strand 5
B
167 171parallel
Strand 6
B
112 116parallel
Strand 7
B
138 142parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 309first strand
Strand 2
B
318 322anti-parallel
Strand 3
B
361 365anti-parallel
Strand 4
B
345 346anti-parallel
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