Analysis of interatomic Contacts of Structural Units in PDB entry:
3H7M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H7M entry

There is 1 chain in PDB entry 3H7M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 52PRO 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 3H7M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
80 94Right-handed alpha
Helix 2
2
A
103 105Right-handed 310
Helix 3
3
A
106 113Right-handed alpha
Helix 4
4
A
125 130Right-handed alpha
Helix 5
5
A
156 161Right-handed 310
Helix 6
6
A
171 179Right-handed alpha
Helix 7
7
A
180 181Right-handed 310
Helix 8
8
A
182 184Right-handed 310
Helix 9
9
A
191 201Right-handed alpha
Helix 10
10
A
211 221Right-handed alpha
Helix 11
11
A
246 264Right-handed alpha
Helix 12
12
A
264 273Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3H7M. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 102first strand
Strand 2
A
58 63parallel
Strand 3
A
118 123parallel
Strand 4
A
226 243anti-parallel
Strand 5
A
132 148anti-parallel
Strand 6
A
206 210anti-parallel
Strand 7
A
165 168parallel
Strand 8
A
186 189parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
70 72anti-parallel
Strand 3
A
78 79anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il