Analysis of interatomic Contacts of Structural Units in PDB entry:
3H7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H7T entry

There are 2 chains in PDB entry 3H7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 1GLN 235
B
 ILE 1GLN 235
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3H7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 44Right-handed alpha
Helix 2
2
A
47 49Right-handed 310
Helix 3
3
A
148 158Right-handed alpha
Helix 4
4
A
159 160Right-handed 310
Helix 5
5
A
161 165Right-handed 310
Helix 6
6
A
220 229Right-handed alpha
Helix 7
7
B
39 44Right-handed alpha
Helix 8
8
B
47 49Right-handed 310
Helix 9
9
B
148 158Right-handed alpha
Helix 10
10
B
159 160Right-handed 310
Helix 11
11
B
161 165Right-handed 310
Helix 12
12
B
217 229Right-handed alpha
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There are 4 sheets in PDB entry 3H7T. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
140 147anti-parallel
Strand 3
A
169 172anti-parallel
Strand 4
A
212 216anti-parallel
Strand 5
A
195 200anti-parallel
Strand 6
A
189 192anti-parallel
Strand 7
A
119 124anti-parallel
Strand 8
A
140 147anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
A
26 30anti-parallel
Strand 3
A
35 38anti-parallel
Strand 4
A
87 91anti-parallel
Strand 5
A
65 74anti-parallel
Strand 6
A
51 55anti-parallel
Strand 7
A
15 20anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
140 147anti-parallel
Strand 3
B
169 173anti-parallel
Strand 4
B
212 216anti-parallel
Strand 5
B
195 200anti-parallel
Strand 6
B
189 192anti-parallel
Strand 7
B
119 124anti-parallel
Strand 8
B
140 147anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 20first strand
Strand 2
B
26 30anti-parallel
Strand 3
B
35 38anti-parallel
Strand 4
B
87 91anti-parallel
Strand 5
B
65 74anti-parallel
Strand 6
B
51 55anti-parallel
Strand 7
B
15 20anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il