Analysis of interatomic Contacts of Structural Units in PDB entry:
3H84


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H84 entry

There are 2 chains in PDB entry 3H84 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5LEU 350
B
 VAL 5GLU 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3H84. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed alpha
Helix 2
2
A
30 46Right-handed alpha
Helix 3
3
A
60 67Right-handed alpha
Helix 4
4
A
89 107Right-handed alpha
Helix 5
5
A
116 121Right-handed alpha
Helix 6
6
A
122 125Right-handed 310
Helix 7
7
A
126 130Right-handed 310
Helix 8
8
A
135 153Right-handed alpha
Helix 9
9
A
174 177Right-handed 310
Helix 10
10
A
178 190Right-handed alpha
Helix 11
11
A
211 231Right-handed alpha
Helix 12
12
A
245 262Right-handed alpha
Helix 13
13
A
285 306Right-handed alpha
Helix 14
14
A
322 332Right-handed alpha
Helix 15
15
A
333 335Right-handed 310
Helix 16
16
A
339 350Right-handed alpha
Helix 17
17
B
9 14Right-handed alpha
Helix 18
18
B
30 46Right-handed alpha
Helix 19
19
B
60 67Right-handed alpha
Helix 20
20
B
118 133Right-handed alpha
Helix 21
21
B
135 155Right-handed alpha
Helix 22
22
B
174 177Right-handed 310
Helix 23
23
B
178 195Right-handed alpha
Helix 24
24
B
199 206Right-handed alpha
Helix 25
25
B
212 231Right-handed alpha
Helix 26
26
B
245 262Right-handed alpha
Helix 27
27
B
285 306Right-handed alpha
Helix 28
28
B
323 336Right-handed alpha
Helix 29
29
B
339 348Right-handed alpha
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There are 2 sheets in PDB entry 3H84. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
51 55parallel
Strand 4
A
162 166parallel
Strand 5
A
20 24parallel
Strand 6
A
236 243parallel
Strand 7
A
268 274parallel
Strand 8
A
310 315parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 87anti-parallel
Strand 3
B
51 55parallel
Strand 4
B
162 166parallel
Strand 5
B
20 24parallel
Strand 6
B
236 243parallel
Strand 7
B
268 274parallel
Strand 8
B
310 315parallel
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