Analysis of interatomic Contacts of Structural Units in PDB entry:
3H8F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H8F entry

There are 6 chains in PDB entry 3H8F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 497
B
 MET 1ALA 497
C
 MET 1ALA 497
D
 MET 1ALA 497
E
 MET 1ALA 497
F
 MET 1ALA 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are109 helices in PDB entry 3H8F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 39Right-handed alpha
Helix 2
2
A
41 48Right-handed alpha
Helix 3
3
A
85 102Right-handed alpha
Helix 4
4
A
123 138Right-handed alpha
Helix 5
5
A
165 192Right-handed alpha
Helix 6
6
A
198 213Right-handed alpha
Helix 7
7
A
222 229Right-handed alpha
Helix 8
8
A
231 239Right-handed alpha
Helix 9
9
A
283 290Right-handed 310
Helix 10
10
A
291 308Right-handed alpha
Helix 11
11
A
351 364Right-handed alpha
Helix 12
12
A
365 367Right-handed 310
Helix 13
13
A
378 386Right-handed alpha
Helix 14
14
A
396 411Right-handed alpha
Helix 15
15
A
420 428Right-handed 310
Helix 16
16
A
442 453Right-handed alpha
Helix 17
17
A
483 496Right-handed alpha
Helix 18
18
B
29 39Right-handed alpha
Helix 19
19
B
41 48Right-handed alpha
Helix 20
20
B
85 102Right-handed alpha
Helix 21
21
B
124 137Right-handed alpha
Helix 22
22
B
165 192Right-handed alpha
Helix 23
23
B
198 213Right-handed alpha
Helix 24
24
B
222 229Right-handed alpha
Helix 25
25
B
231 239Right-handed alpha
Helix 26
26
B
283 290Right-handed 310
Helix 27
27
B
291 308Right-handed alpha
Helix 28
28
B
351 364Right-handed alpha
Helix 29
29
B
365 367Right-handed 310
Helix 30
30
B
379 386Right-handed alpha
Helix 31
31
B
396 411Right-handed alpha
Helix 32
32
B
420 428Right-handed 310
Helix 33
33
B
442 453Right-handed alpha
Helix 34
34
B
483 496Right-handed alpha
Helix 35
35
C
9 13Right-handed 310
Helix 36
36
C
29 39Right-handed alpha
Helix 37
37
C
41 49Right-handed alpha
Helix 38
38
C
85 102Right-handed alpha
Helix 39
39
C
124 137Right-handed alpha
Helix 40
40
C
162 164Right-handed 310
Helix 41
41
C
165 192Right-handed alpha
Helix 42
42
C
198 213Right-handed alpha
Helix 43
43
C
222 229Right-handed alpha
Helix 44
44
C
231 239Right-handed alpha
Helix 45
45
C
283 290Right-handed 310
Helix 46
46
C
291 308Right-handed alpha
Helix 47
47
C
351 363Right-handed alpha
Helix 48
48
C
364 367Right-handed 310
Helix 49
49
C
378 386Right-handed alpha
Helix 50
50
C
396 411Right-handed alpha
Helix 51
51
C
420 428Right-handed 310
Helix 52
52
C
442 453Right-handed alpha
Helix 53
53
C
483 495Right-handed alpha
Helix 54
54
D
9 13Right-handed 310
Helix 55
55
D
25 27Right-handed 310
Helix 56
56
D
29 39Right-handed alpha
Helix 57
57
D
41 48Right-handed alpha
Helix 58
58
D
85 102Right-handed alpha
Helix 59
59
D
123 137Right-handed alpha
Helix 60
60
D
165 192Right-handed alpha
Helix 61
61
D
198 211Right-handed alpha
Helix 62
62
D
222 229Right-handed alpha
Helix 63
63
D
231 239Right-handed alpha
Helix 64
64
D
283 290Right-handed 310
Helix 65
65
D
291 308Right-handed alpha
Helix 66
66
D
351 363Right-handed alpha
Helix 67
67
D
364 367Right-handed 310
Helix 68
68
D
378 386Right-handed alpha
Helix 69
69
D
396 411Right-handed alpha
Helix 70
70
D
420 428Right-handed 310
Helix 71
71
D
442 453Right-handed alpha
Helix 72
72
D
483 496Right-handed alpha
Helix 73
73
E
29 39Right-handed alpha
Helix 74
74
E
41 50Right-handed alpha
Helix 75
75
E
85 102Right-handed alpha
Helix 76
76
E
124 137Right-handed alpha
Helix 77
77
E
165 192Right-handed alpha
Helix 78
78
E
198 213Right-handed alpha
Helix 79
79
E
222 229Right-handed alpha
Helix 80
80
E
231 239Right-handed alpha
Helix 81
81
E
283 290Right-handed 310
Helix 82
82
E
291 308Right-handed alpha
Helix 83
83
E
351 363Right-handed alpha
Helix 84
84
E
364 367Right-handed 310
Helix 85
85
E
378 386Right-handed alpha
Helix 86
86
E
396 410Right-handed alpha
Helix 87
87
E
420 425Right-handed alpha
Helix 88
88
E
426 428Right-handed 310
Helix 89
89
E
442 453Right-handed alpha
Helix 90
90
E
483 496Right-handed alpha
Helix 91
91
F
9 13Right-handed 310
Helix 92
92
F
23 27Right-handed 310
Helix 93
93
F
29 39Right-handed alpha
Helix 94
94
F
41 49Right-handed alpha
Helix 95
95
F
85 103Right-handed alpha
Helix 96
96
F
124 137Right-handed alpha
Helix 97
97
F
165 192Right-handed alpha
Helix 98
98
F
198 212Right-handed alpha
Helix 99
99
F
222 229Right-handed alpha
Helix 100
100
F
231 239Right-handed alpha
Helix 101
101
F
283 290Right-handed 310
Helix 102
102
F
291 308Right-handed alpha
Helix 103
103
F
351 363Right-handed alpha
Helix 104
104
F
364 367Right-handed 310
Helix 105
105
F
378 386Right-handed alpha
Helix 106
106
F
396 411Right-handed alpha
Helix 107
107
F
420 428Right-handed 310
Helix 108
108
F
442 453Right-handed alpha
Helix 109
109
F
483 495Right-handed alpha
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There are 24 sheets in PDB entry 3H8F. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
156 160parallel
Strand 3
A
107 110parallel
Strand 4
A
15 22parallel
Strand 5
A
70 77parallel
Strand 6
A
59 63anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 221first strand
Strand 2
A
246 253anti-parallel
Strand 3
A
312 322anti-parallel
Strand 4
A
262 272parallel
Strand 5
A
370 375parallel
Strand 6
A
460 464parallel
Strand 7
A
390 394anti-parallel
Strand 8
A
414 416parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 336first strand
Strand 2
A
342 345anti-parallel
Strand 3
A
434 435parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
470 471first strand
Strand 2
A
478 479anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
156 160parallel
Strand 3
B
107 110parallel
Strand 4
B
15 22parallel
Strand 5
B
70 77parallel
Strand 6
B
59 62anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 221first strand
Strand 2
B
246 253anti-parallel
Strand 3
B
312 322anti-parallel
Strand 4
B
262 272parallel
Strand 5
B
370 375parallel
Strand 6
B
460 464parallel
Strand 7
B
390 394anti-parallel
Strand 8
B
414 416parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 336first strand
Strand 2
B
342 345anti-parallel
Strand 3
B
434 435parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
470 471first strand
Strand 2
B
478 479anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 6first strand
Strand 2
C
156 160parallel
Strand 3
C
107 110parallel
Strand 4
C
18 23parallel
Strand 5
C
72 79parallel
Strand 6
C
59 63anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 221first strand
Strand 2
C
246 253anti-parallel
Strand 3
C
312 322anti-parallel
Strand 4
C
262 272parallel
Strand 5
C
370 375parallel
Strand 6
C
460 464parallel
Strand 7
C
390 394anti-parallel
Strand 8
C
414 416parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
333 336first strand
Strand 2
C
342 345anti-parallel
Strand 3
C
434 435parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
470 471first strand
Strand 2
C
478 479anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 6first strand
Strand 2
D
156 160parallel
Strand 3
D
107 110parallel
Strand 4
D
18 23parallel
Strand 5
D
72 79parallel
Strand 6
D
59 63anti-parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
216 221first strand
Strand 2
D
246 253anti-parallel
Strand 3
D
312 322anti-parallel
Strand 4
D
262 272parallel
Strand 5
D
370 375parallel
Strand 6
D
460 464parallel
Strand 7
D
390 394anti-parallel
Strand 8
D
414 416parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
333 336first strand
Strand 2
D
342 345anti-parallel
Strand 3
D
434 435parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
470 471first strand
Strand 2
D
478 479anti-parallel
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There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 6first strand
Strand 2
E
156 160parallel
Strand 3
E
107 110parallel
Strand 4
E
15 23parallel
Strand 5
E
70 79parallel
Strand 6
E
59 62anti-parallel
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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
216 221first strand
Strand 2
E
246 253anti-parallel
Strand 3
E
312 322anti-parallel
Strand 4
E
262 272parallel
Strand 5
E
370 375parallel
Strand 6
E
460 464parallel
Strand 7
E
390 394anti-parallel
Strand 8
E
414 416parallel
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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
333 336first strand
Strand 2
E
342 345anti-parallel
Strand 3
E
434 435parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
470 471first strand
Strand 2
E
478 479anti-parallel
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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 6first strand
Strand 2
F
156 160parallel
Strand 3
F
107 110parallel
Strand 4
F
18 22parallel
Strand 5
F
72 77parallel
Strand 6
F
59 63anti-parallel
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There are 8 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
216 221first strand
Strand 2
F
246 253anti-parallel
Strand 3
F
312 322anti-parallel
Strand 4
F
262 272parallel
Strand 5
F
370 375parallel
Strand 6
F
460 464parallel
Strand 7
F
390 394anti-parallel
Strand 8
F
414 416parallel
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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
333 336first strand
Strand 2
F
342 345anti-parallel
Strand 3
F
434 435parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
470 471first strand
Strand 2
F
478 479anti-parallel
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