Analysis of interatomic Contacts of Structural Units in PDB entry:
3H8J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H8J entry

There is 1 chain in PDB entry 3H8J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 9PHE 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3H8J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 32Right-handed alpha
Helix 2
2
A
39 62Right-handed alpha
Helix 3
3
A
77 83Right-handed alpha
Helix 4
4
A
87 97Right-handed alpha
Helix 5
5
A
100 119Right-handed alpha
Helix 6
6
A
130 145Right-handed alpha
Helix 7
7
A
158 162Right-handed 310
Helix 8
8
A
184 196Right-handed alpha
Helix 9
9
A
197 201Right-handed 310
Helix 10
10
A
210 215Right-handed alpha
Helix 11
11
A
225 235Right-handed alpha
Helix 12
12
A
238 243Right-handed alpha
Helix 13
13
A
244 259Right-handed alpha
Helix 14
14
A
260 263Right-handed 310
Helix 15
15
A
264 277Right-handed alpha
Helix 16
16
A
284 293Right-handed alpha
Helix 17
17
A
301 305Right-handed 310
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There is 1 sheet ( A) in PDB entry 3H8J.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
65 69parallel
Strand 3
A
15 19parallel
Strand 4
A
149 152parallel
Strand 5
A
167 171parallel
Strand 6
A
176 178anti-parallel
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