Analysis of interatomic Contacts of Structural Units in PDB entry:
3H8L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H8L entry

There are 2 chains in PDB entry 3H8L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2GLU 357
B
 THR 2GLU 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3H8L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 25Right-handed alpha
Helix 2
2
A
26 28Right-handed 310
Helix 3
3
A
62 66Right-handed alpha
Helix 4
4
A
67 70Right-handed 310
Helix 5
5
A
115 118Right-handed 310
Helix 6
6
A
120 125Right-handed alpha
Helix 7
7
A
132 144Right-handed alpha
Helix 8
8
A
179 195Right-handed alpha
Helix 9
9
A
217 232Right-handed alpha
Helix 10
10
A
271 276Right-handed alpha
Helix 11
11
A
278 282Right-handed 310
Helix 12
12
A
306 309Right-handed 310
Helix 13
13
A
316 335Right-handed alpha
Helix 14
14
A
350 354Right-handed 310
Helix 15
15
B
10 25Right-handed alpha
Helix 16
16
B
26 28Right-handed 310
Helix 17
17
B
62 66Right-handed alpha
Helix 18
18
B
67 70Right-handed 310
Helix 19
19
B
115 118Right-handed 310
Helix 20
20
B
120 125Right-handed alpha
Helix 21
21
B
132 144Right-handed alpha
Helix 22
22
B
179 196Right-handed alpha
Helix 23
23
B
217 232Right-handed alpha
Helix 24
24
B
271 276Right-handed alpha
Helix 25
25
B
306 309Right-handed 310
Helix 26
26
B
316 335Right-handed alpha
Helix 27
27
B
350 354Right-handed 310
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There are 12 sheets in PDB entry 3H8L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
29 34parallel
Strand 3
A
3 7parallel
Strand 4
A
104 107parallel
Strand 5
A
302 304parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
58 61anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 82first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
97 101anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
268 269anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
261 265parallel
Strand 3
A
147 153parallel
Strand 4
A
202 207parallel
Strand 5
A
234 236parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 244first strand
Strand 2
A
248 251anti-parallel
Strand 3
A
256 258anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 75first strand
Strand 2
B
29 34parallel
Strand 3
B
3 7parallel
Strand 4
B
104 107parallel
Strand 5
B
302 304parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 41first strand
Strand 2
B
58 61anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 82first strand
Strand 2
B
87 91anti-parallel
Strand 3
B
97 101anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 113first strand
Strand 2
B
268 269anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 127first strand
Strand 2
B
261 265parallel
Strand 3
B
147 153parallel
Strand 4
B
202 207parallel
Strand 5
B
234 236parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
241 244first strand
Strand 2
B
248 251anti-parallel
Strand 3
B
256 258anti-parallel
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