Analysis of interatomic Contacts of Structural Units in PDB entry:
3H8S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H8S entry

There is 1 chain in PDB entry 3H8S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 11PHE 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3H8S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 32Right-handed alpha
Helix 2
2
A
39 61Right-handed alpha
Helix 3
3
A
77 82Right-handed 310
Helix 4
4
A
100 118Right-handed alpha
Helix 5
5
A
130 145Right-handed alpha
Helix 6
6
A
155 162Right-handed 310
Helix 7
7
A
183 196Right-handed alpha
Helix 8
8
A
197 201Right-handed 310
Helix 9
9
A
210 215Right-handed alpha
Helix 10
10
A
225 235Right-handed alpha
Helix 11
11
A
236 241Right-handed 310
Helix 12
12
A
244 259Right-handed alpha
Helix 13
13
A
260 263Right-handed 310
Helix 14
14
A
264 277Right-handed alpha
Helix 15
15
A
283 293Right-handed alpha
Helix 16
16
A
295 305Right-handed 310
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There is 1 sheet ( A) in PDB entry 3H8S.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
65 69parallel
Strand 3
A
15 19parallel
Strand 4
A
149 152parallel
Strand 5
A
167 171parallel
Strand 6
A
176 177anti-parallel
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